| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8776 |
|---|
| Symbol | |
|---|
| ID | 8340168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 10176540 |
|---|
| End bp | 10177925 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644961867 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003119432 |
|---|
| Protein GI | 256397868 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCATA CCGCGCAATT CGCCCCCGTG GAGCGGCCTG GCCAGGCCTT CTCCCCCGCG
CCTCCCGAGG ACGACGGTTA CCCGGGCGGC CAGATCCCCG AATCCTCCGG CTTCTCCTGG
CGTCTGCCGG GCCAGCCGGC GCCGGTGCAG CACGCACAGG GCGGGATTCC CAACGAGTTC
GACCACCTCT TCCGCGACGC GCCGGCCGAC GACCGCCGCT CGCTGCTGCC CAACCAGGGC
ACGATAGGGG TGTCGGTCCC GGGAGCCGCG GGCTATTCGG GACCGTCGTA TCCGCAGAAC
CCTGCCACAG GCGCCCAGCG CCCGGCTCCG GGTCCCGGAC CGGGCCCGCA GCCCACGCAG
TCGCTGCCGC CGGCCGACGC CACCGGACCG CAGACGGCGG TCTACCAGCC GCCGACGCAG
GACCAGGTCG GCTACCCGGA CCAGACCGGC TATCAGCAGC AGGGCGGCTA CCAGAACCAG
GGTGGCTACC AGGACCAGGG TGGCTACCAG GACCAGACCG GTTATCAGGA CCAGACCGGC
TACCAGAACC AGACCGGGTA CCAGAACCAG GGCGGCTACG GGCAGCAGCA GATGCCCGGC
CACGGCTACG ACCAGAGCGG CTACCAGGGG CAGACGCAGC AGCAGGGCGG CTACGACCCC
GACCAGCACA CGCAGGCGAT CCCGCGGGTG CAGCCGCAGA TGTACGGCGG CGGACGCAAC
AACGGCGGAC CCGACCTGTT GATGGCCACC GGCCCGGACC GGCGCCAGTC GAACCGCACC
CTGCTGGTCG CCATCGGCGT GTTCGTGGTG CTGATCGTGG TCGCCGTCGT GGCGTTCTCC
GGCGGAGGCG GCAAGTCCAA GACGAACACC GCGGGCAAGT CCACGAACAC CGACACCCCG
CCGCCGACCA CCAGCGTCTC GGCGCCCCCC GGCGTGGACC CGGCCGCCAA GGCCCAGGCC
GACGCCCTCT ACGGCATCAT CGCGCAGAGC CACGCCCTGC GGGAGAAGGC CAACGCGTCG
GTCGAAGCCG TCCAGCAGTG CAAGAACGTC GCCACCAACA AGCAGACCTT CACCGACGTC
GCGACCCAGC GCCAGGCCCA AGCCGACGGC ACCAAGGCGG CGGCGGTCGA CAAGCTCCCC
GGCGGAGCCC AGCTCCAGCA GGACCTGATC ACCTCCTGGC AGCTCTCCGC GGAGTCCGAG
AAGGACTACG CCGCCTGGTC CAACGACAAC CTGACCTGCA CCGGCAAGCC CACCGCGAAC
GACAACCTCA ACCGCGCCAG CAGCGCCGGC GGCAAGGCCG GCACCGCCAA GAACGCGGCC
GTCAGGGACT GGAACGCCTT CGCCACCAAG CTCGGCGTGC ACACGATCAC CATCTCCGAC
CTGTGA
|
|---|
| Protein sequence | MPHTAQFAPV ERPGQAFSPA PPEDDGYPGG QIPESSGFSW RLPGQPAPVQ HAQGGIPNEF
DHLFRDAPAD DRRSLLPNQG TIGVSVPGAA GYSGPSYPQN PATGAQRPAP GPGPGPQPTQ
SLPPADATGP QTAVYQPPTQ DQVGYPDQTG YQQQGGYQNQ GGYQDQGGYQ DQTGYQDQTG
YQNQTGYQNQ GGYGQQQMPG HGYDQSGYQG QTQQQGGYDP DQHTQAIPRV QPQMYGGGRN
NGGPDLLMAT GPDRRQSNRT LLVAIGVFVV LIVVAVVAFS GGGGKSKTNT AGKSTNTDTP
PPTTSVSAPP GVDPAAKAQA DALYGIIAQS HALREKANAS VEAVQQCKNV ATNKQTFTDV
ATQRQAQADG TKAAAVDKLP GGAQLQQDLI TSWQLSAESE KDYAAWSNDN LTCTGKPTAN
DNLNRASSAG GKAGTAKNAA VRDWNAFATK LGVHTITISD L
|
|---|
| |