| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8769 |
|---|
| Symbol | |
|---|
| ID | 8340161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 10169415 |
|---|
| End bp | 10170167 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644961860 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003119425 |
|---|
| Protein GI | 256397861 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.540282 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGT TGGACGGGCG CGTGGTGCTG ATCACCGGCG CCGCGCGCGG TCAGGGAGCC
GAGGAGGCCC GGCTGTTCGC GGCCGAGGGG GCGAACGTCG TGGTCGCCGA CGTGCTGGAG
GACCTCGGCG CGCAGGTGGC CAAGGAGATC GGGGACGCGG CGCGCTTCGT GCGGCTCGAC
GTCACCGACG AGGCGCAGTG GACCGCCGCC GCGGACCTCG CCGCGGCCGA GTTCGGCAAG
CTCGACGGTC TGATCAACAA CGCCGGCATC CTGCGCTTCA ACCGGCTCGA GAAGACCTCG
CTCGAGGAGT ACATGCAGGT GGTGGCGGTG AACCAGGTCG GGGTCTTCCT GGGGCTGCAC
GTGTGCCTGC CCCGGATCCG GGCGGCCGGC GGCGGCACCG TGGTGAACAC CGCGAGCATC
GACGGGCTCG CCGGCATGGC GTATCTGGGC TCTTATGTCT CCACCAAGTT CGCCGTCAGA
GGCCTGACAC GCGTCGCGGC CCTGGAAGCC GCGCCGACCG TCCGGGTGAA CTGCATCTGC
CCCGGCGGCG TCCACACCCC GATGGTGACC GACCTTCTGC CCTCGGACTC CGACCCCGAC
GCCGGCTACT CCGGCATCCC GCTCAAGCGC GTCGGCACGG CGACCGAGAT CGCGAAGGCC
GCGCTGTTCC TCACCTGCGA CGACTCGTCC TACTGCACCG GCGCCGACTT CGTCCTCGAC
GGCGGAGCGC TGGCGGGCAT CCGCTTCGAC TAG
|
|---|
| Protein sequence | MGKLDGRVVL ITGAARGQGA EEARLFAAEG ANVVVADVLE DLGAQVAKEI GDAARFVRLD
VTDEAQWTAA ADLAAAEFGK LDGLINNAGI LRFNRLEKTS LEEYMQVVAV NQVGVFLGLH
VCLPRIRAAG GGTVVNTASI DGLAGMAYLG SYVSTKFAVR GLTRVAALEA APTVRVNCIC
PGGVHTPMVT DLLPSDSDPD AGYSGIPLKR VGTATEIAKA ALFLTCDDSS YCTGADFVLD
GGALAGIRFD
|
|---|
| |