| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8762 |
|---|
| Symbol | |
|---|
| ID | 8340154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 10161167 |
|---|
| End bp | 10162699 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644961853 |
|---|
| Product | long-chain-fatty-acid--CoA ligase |
|---|
| Protein accession | YP_003119418 |
|---|
| Protein GI | 256397854 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.225168 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCAAG GCGAGACAAC GATCCCGGAT CTGGTGGCGC GCGCCGCCGC CGAACACGGC
GACCAAGAGG CGGTAGTTGA CGGCGAGCAG CGCTTGACGT TCGCCGAGCT CGCCGCCCGG
GTGAGACAGG CGGGCCGGGC GATGATCGCC TGGGGCGTGC GGCCCGGCGA CCGGGTGGCG
ATCTGGGCGC CGAACTCGGC GGAGTGGATC GCGACGGCCC TCGGCGCGGT GTCCGTGGGC
GCCGTATTGG TCCCGCTGAA CACCCGGCTG AAGGCAGCCG AGGTCGGCTA CATCCTGCGC
ACGTCGCGGA CCAGACTTGT CGCGGTCGCC GGGGAGTTCC TGGGCGTGGA CTACGTCGGA
CAGCTCGCGG CGATCCACGA TGAGCTGCCG GATCTGGAGA CCCTGACCGC CTTCACCGAC
GGCGGACTGC CGCCGGTGGT GTCCCGCCGC CAGTTCCGCG CGCCGGGGAT GAAGGTCCCG
GCGCCGGTGT TCGACGAGGC GGCGGCGTCG CTGACCCCTG ATTCGCCGGC GGACCTGTTC
TTCACCTCGG GCACGACCGG CGCCCCGAAG GGCGTGGAGA CGACGCACGG ACAGACCACG
CGCGCCTTCC ACGCCTGGTC GGAGATCGTC GGCCTGCGCG CCGGGGACCG CTACCTGATC
GCGAACCCCT TCTCGCACAC CTTCGGCTAC AAGGCCGGGA TCCTGGCCTG CCTGATGCGC
GGCGCGACGA TGGTCCCGCT GCCCTCGTTC GACGCCGAGG CGCTGTTCAC CACGATCGAG
CAGGAGCGGA TCACCGTGTT CCCGGCGGCG CCGGCGGTCT ACCAGATGAT GCTGGCGCAC
CCGGATCTGG CGAAGCACGA TCTCAGCTCC CTGCGAGCGG CAGCCACCGG CGCCGCAGTG
ATCCCGGTGG AGCTGATCGA GCGGATGCGC GACACGCTGG GCCTGTCGAC CGTGATCACC
GCCTACGGCC TGACCGAGGC GACGGGTGTG GTGACGATGT GCCGCGACGG CGACACCCCC
GACGTCGTCG CCCGCACCTC GGGCCGGGCG ATCGAGGGCG TCGAGGTGCG GATCGCCGAG
GCCACCGGGG AGATCCTGGT CCGCGGCTAC AACGTGATGA GCGGCTACTT CGAGGACGAG
GCGGCCACCG CCGAGGCGAT CGACGCCGAC GGCTGGCTGC ACACCGGCGA CGTCGGCGAC
CTCGACGAGG CGGGCAACCT GCGCATCACC GACCGGATCA AGGACATGTA CATCTGCGGC
GGCTTCAACG CCTACCCGGC GGAGATCGAG CAGGTGCTGC TGACGTTCCC CGGCGTGCAG
GAGGCGGCGG TCATCGGCGT GCCGGACCAG CGGCTCGGGG AGGTCGGGAA AGCGTTCGTG
ATAGCTGTGC CGGGGCAACG GATCGAGCCG GCAGAACTCC TCAAGTACGC CGAGGAACGC
CTCGCCAACT ACAAAGTGCC GCGGCACCTG GAGCTGGTCG AGGCGTTCCC GCGCAGTTCG
CTGGGGAAGG TGCTCAAGCG CGAACTGCAG TGA
|
|---|
| Protein sequence | MEQGETTIPD LVARAAAEHG DQEAVVDGEQ RLTFAELAAR VRQAGRAMIA WGVRPGDRVA
IWAPNSAEWI ATALGAVSVG AVLVPLNTRL KAAEVGYILR TSRTRLVAVA GEFLGVDYVG
QLAAIHDELP DLETLTAFTD GGLPPVVSRR QFRAPGMKVP APVFDEAAAS LTPDSPADLF
FTSGTTGAPK GVETTHGQTT RAFHAWSEIV GLRAGDRYLI ANPFSHTFGY KAGILACLMR
GATMVPLPSF DAEALFTTIE QERITVFPAA PAVYQMMLAH PDLAKHDLSS LRAAATGAAV
IPVELIERMR DTLGLSTVIT AYGLTEATGV VTMCRDGDTP DVVARTSGRA IEGVEVRIAE
ATGEILVRGY NVMSGYFEDE AATAEAIDAD GWLHTGDVGD LDEAGNLRIT DRIKDMYICG
GFNAYPAEIE QVLLTFPGVQ EAAVIGVPDQ RLGEVGKAFV IAVPGQRIEP AELLKYAEER
LANYKVPRHL ELVEAFPRSS LGKVLKRELQ
|
|---|
| |