| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8757 |
|---|
| Symbol | |
|---|
| ID | 8340149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 10156589 |
|---|
| End bp | 10157359 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644961848 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_003119413 |
|---|
| Protein GI | 256397849 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.215149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0548986 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGTCGT TCACCGGAAG GGTCGCCGTC GTCACCGGCG GGACCAAAGG CATCGGACGG
GCGGTCGCGG CGCGCTTCGA AGCCGCCGGG GCGACCGTGG TCACGCTGGC GCGCAGCGAG
CCGGCGCAGG CCGTCGGCCG CTTCATCGCC GCGGACCTCG CCTCGTCCGC CGACATCGTG
GCGGCGTTCA AGGCGGTCGC CGAGGAGTTC GGGCGGGTCG ACGTGCTCGT CAACAACGCC
GGCGGGGCGC GGCCGGGGCG GGCGCTGGAC TATCCCGAGG AGGCCGCCCG CGCCGCCTTC
GATCTCAACG TGCTGGGAGT CCTCTGCGCC GCGCAGTGCA TGTACCCGCT CACGCCCGAG
CACGGCGGCG CCTCCATCGT GAACATCGGA TCGGTGGCCG GGACGCGGCC GAGTCCCGGC
ACGGCCGTCT ACGGCGCCGC CAAGGCCGCG CTCGCCTCGC TCACCAAGAG CCTGGCGCTG
GAGTGGGCGC CGCGGGTGCG GGTGAACTGC GTCGTGCCCG GGCCCGTGCT CACCGAGTCG
CTGACCGCCT ACTACGGCGG TCCGGAGGCT GCGGCGCTGG TCGGGCAGGG GTTGCCGATG
GGGCGGATGG CCGAGCCGGG GGACATCGCC GGCGCCTGTC TCTACCTGGC CTCGGACGAG
GCGGGGCAGG TTTCCGGCGC GGAGTTGCTC GTGCACGGCG GCGGCGAGGC GCCGCGCTTC
AACCGCGAGT CCGGGGCGGC CGGGCGCGCG GCGGGGACCG GCGGGAAGTG A
|
|---|
| Protein sequence | MTSFTGRVAV VTGGTKGIGR AVAARFEAAG ATVVTLARSE PAQAVGRFIA ADLASSADIV
AAFKAVAEEF GRVDVLVNNA GGARPGRALD YPEEAARAAF DLNVLGVLCA AQCMYPLTPE
HGGASIVNIG SVAGTRPSPG TAVYGAAKAA LASLTKSLAL EWAPRVRVNC VVPGPVLTES
LTAYYGGPEA AALVGQGLPM GRMAEPGDIA GACLYLASDE AGQVSGAELL VHGGGEAPRF
NRESGAAGRA AGTGGK
|
|---|
| |