Gene Caci_8730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8730 
Symbol 
ID8340122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10122843 
End bp10123748 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content69% 
IMG OID644961821 
Producthypothetical protein 
Protein accessionYP_003119386 
Protein GI256397822 
COG category[R] General function prediction only 
COG ID[COG3687] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.342187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.275605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACC TGAAGCCGCG GCGCGTGAAG TTCGACTGGG AGAACACGCC GCTGCACTGG 
ATCCCCGAGG ATCCGTACGC GACGCACATC ATCAACGTGC TGCACCTGCT GCTGCCGGCC
GGCGAGCGCT GGTTCGTGCA CGTCTACAAG CAGATCCTGC CCTACATCCA CGACGAACAG
CTCAAGGCCG AGGTCAAGGG CTTCATGGGC CAGGAGGGCA CGCACGCCGT CGCGCACCAG
AACGTCCTGC ACCACATGAA GGTGCAGGGG CTGGACCCGG ACCCCTTCGT GGCGCAGATC
GAGTGGCTCT TCGAGCAGTT GCTCGGCGAC AGCACCATGC CGCCGTTTGC CCGCGAGAAG
TGGCTGCGCG AGCGGCTCGC GATCATCGCG GCGATCGAGC ACTTCACCGC CGTGCTCGGC
AAGTGGATCG TGGACTCGCG CGGGCTGGAC GCCGCCGGCG CCGACCCGGT GATGCTCGAC
CTGCTGCGCT GGCACGGCGC CGAGGAGGTG GAGCACCGCT CGGTGGCCTA CGACGTCTTC
ATGCACCTGG ACGGCTCCTA CGCCCGGCGC ACCCGCGCGA TGCTGGTGAC CTCCGTGGCC
TTCGCCTGGA TCTGGGGCCG CGGCACGAAG TTCATGGTCG CCCACGACCC CCACGAGCTA
CGCGCAGGGC GCCCGACCGC GATGACCGAA CGCGAGTTCC TGGGACGCTT CCGCGACGCC
GCACGGCGTG GACGACTGCC GTCCCTGAGC AGCCTGGTCG TCGAGGTCCC GAAGTACCTC
AAGCCCTCGT ACCATCCCTC GCGTCATGGA TCCACGCAGT CTGCGCTGGA CTACCTGGCG
GTGTCCCCGG CCGCCGTCTA CGCGGCCGAG CTGGCTGCGG CGCGCAAGAG CGACGTCGAC
GGCTGA
 
Protein sequence
MADLKPRRVK FDWENTPLHW IPEDPYATHI INVLHLLLPA GERWFVHVYK QILPYIHDEQ 
LKAEVKGFMG QEGTHAVAHQ NVLHHMKVQG LDPDPFVAQI EWLFEQLLGD STMPPFAREK
WLRERLAIIA AIEHFTAVLG KWIVDSRGLD AAGADPVMLD LLRWHGAEEV EHRSVAYDVF
MHLDGSYARR TRAMLVTSVA FAWIWGRGTK FMVAHDPHEL RAGRPTAMTE REFLGRFRDA
ARRGRLPSLS SLVVEVPKYL KPSYHPSRHG STQSALDYLA VSPAAVYAAE LAAARKSDVD
G