| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8727 |
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| Symbol | |
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| ID | 8340119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 10117741 |
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| End bp | 10119510 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961818 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003119383 |
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| Protein GI | 256397819 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2247] Putative cell wall-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.225168 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAACG AAAACAACCA CTCTGTGGCC CGCAAGCGCC TTTCGACGCT GGCCATCACC
ACCACGCTGG CAGCCGTCGG CGTGGGCGTC GTCGGCACCG GCGCGGCCAA CGCCGCGACC
ACCTCGCCGT CGGGGCATTC GCAGGAGGGC ACGCAGGCCG TGGCCGCGCC CGTGCTGAAG
TCCGCGGTCA CCGCGGGCAC CGGCGCGACC AGCCTCACCG CCACCGCCGA CCTGACCGGC
ACCACGGTCG ACCCGAGCAT CGCGGCGGCC TCGACGGTCA CCATCAACTG GGACGGCGCC
AAGGACGTCC AGACCCTCCA CTTCGCCGCG GACGGCACGC TGTCCACGAG CAAGGTGCCC
CACGTCTACA CGGCCGGCGG CGCCTATGAC GTCATCGTGA CCGTGAACGA CGGTTCCAAG
ACCCCGCCGA CCGCGACCAC GCACCTCGTC GTGGCCGACG CGACCCTCGC CGCCTCGCTG
TCGGCGAACA CCACCAAGAA GAACAGCCCG GTGACCCTGT CCCTGGCCGG TTCGTCGGTC
GACCAGTCGA TCAAGGCTGC CACGACCACC GTCACCTGGG GCGACAAGGC CACCGCGTCC
TTCGCCGGCG ACCCGGCGAA GATCAGCGCG ACCGACGCCA AGCTGACGCA CTCCTACGCC
GCCGACGGGA CCTACCCCGT CACGGTCACG CTGAACGACG GCCTGGGCAC CAAGACCTCG
GTCCAGACCG AGACCTTCAG CGTGAAGGTC AGCGAGACCG GCGTCGTGGT CCTGCAGGCC
GCCGGCGACA CCCGCTACGA GACCGGCACC CAGATCTCGC AGCACCAGTG GGCGAGCACC
GGCGTGGCCA CGGACAACCG CACGCAGGCC AAGTCGGCGG TGCTGGCCAC CGGCAACGAC
TTCGCCGACG CGCTGGTCGC CGTGCCGCTG GCCAAGAAGG TCCAGGGCCC GCTGCTGCTG
ACCGACGGCA CGCAGACCAA GACCAACCCG ATCGTGGTCA CCGAGATCCA GCGGATCCTG
CCGAAGGGCT CGACCGTCTA CCTGTTGGGC GGTGAAATGG CGCTCAACGC GGGCATCGAG
AAGCAGCTGC AGGGCCTGGG CTACACCACC GTGCGGCTGG CCGGCGCGGA CCGCTTCGCC
ACCGCGCTGC AGGTCGCCGA GAGCCCGAAG GGCATGAACA ACCCCTCGCA CGTCATCGTG
GCCCGCGGTG ACGAGGGCAA GAACCACGAC GGCTTCGCCG ACGCCCTGTC GGCCGGCTCG
TACGCGGCCA ACGTGTTCGG CGCCGGCGAC GGCGGCTCGG CCGTGGTGCT GAGCAACTTC
AAGACCTTCG ACACCGACAC GAAGGCCTAT GTCCAGAGCA AGCTGAAGGC CGGCCAGCAG
GACGTGGCCG CCGTCGGCGG CCAGGCCGCC ACCGCGATGA CGACCATCCT CGGGTCGGAC
AAGACCTACG TCACCGCGGT CGGCCACGAC CGGTACGAGA CCGCTGCGAT CGTGGCCTCG
CACTTCCTGC CGAACGGCAA GGCCGACCAG ATCGGCGTCG CCACCGGCAC CGTCTACGCG
GACGCCCTGA CCGGTGGCGC GTACATGGCC ACCGTCAACG GCCCGCTGCT GCTGACCGAC
CCGAAGGTGC TGCCGGCCTA CACCGCGAAC GCCGTCGGCC AGTTCTCCAC CCAGGAGATC
AACATCTTCG GCGGCAACGT CGCGATCTCG CCGGCCGTCG CCAAGCAGAT CGCCAAGCTG
GTGAACGTCG CCACCATCGG CAAGTTCTAA
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| Protein sequence | MGNENNHSVA RKRLSTLAIT TTLAAVGVGV VGTGAANAAT TSPSGHSQEG TQAVAAPVLK
SAVTAGTGAT SLTATADLTG TTVDPSIAAA STVTINWDGA KDVQTLHFAA DGTLSTSKVP
HVYTAGGAYD VIVTVNDGSK TPPTATTHLV VADATLAASL SANTTKKNSP VTLSLAGSSV
DQSIKAATTT VTWGDKATAS FAGDPAKISA TDAKLTHSYA ADGTYPVTVT LNDGLGTKTS
VQTETFSVKV SETGVVVLQA AGDTRYETGT QISQHQWAST GVATDNRTQA KSAVLATGND
FADALVAVPL AKKVQGPLLL TDGTQTKTNP IVVTEIQRIL PKGSTVYLLG GEMALNAGIE
KQLQGLGYTT VRLAGADRFA TALQVAESPK GMNNPSHVIV ARGDEGKNHD GFADALSAGS
YAANVFGAGD GGSAVVLSNF KTFDTDTKAY VQSKLKAGQQ DVAAVGGQAA TAMTTILGSD
KTYVTAVGHD RYETAAIVAS HFLPNGKADQ IGVATGTVYA DALTGGAYMA TVNGPLLLTD
PKVLPAYTAN AVGQFSTQEI NIFGGNVAIS PAVAKQIAKL VNVATIGKF
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