| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8720 |
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| Symbol | |
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| ID | 8340111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 10110297 |
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| End bp | 10110830 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644961810 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003119376 |
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| Protein GI | 256397812 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0889132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0168967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGA TGGTTCTGTC CGCCCCGGAA TGCCACCGCC AAAGCGGCAC CATTGATGTC
GCCGATCTCT ACGCCACTCA CCGGCTGCCA CTGACGCGGC TCGCGGTGTT GTTGCTCGGC
GACATGGCGA GCGCTGAAGA CGCTGTGCAA GAGGTATTCG TCAAGCTTTG GTCCCGTCCC
GACCTGCTCC AAGGAGTCGC GGCACCGTCC TCCTACCTCC GTACCGCCGT GGTGAACCGC
GCACGGTCGG TCCAACGGAG GCGCAAGCTC GAACGTGAAT ACGCCGTCCA GGACACCAGA
GACGTGGAGC CCGCGGAGAC CACGGCGCTG CTGCCGCTGG AGCACCGCGA AGTCATGGAA
GCCGTGCAGG CGCTCCCCAC TAGGCAGCGG GAGGTGCTGC TGCTGCGCTA TTGGGCCGAT
CTCACAGAGA CGGAGATCGC GCGCACGCTG GGTGTCTCGC GCGGCACGGT GAAGTCCACC
GCGAGCCGTG GGATGCGCGC GGTCACGATA CGACTAAGGG CCGGCAACGC ATAG
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| Protein sequence | MTTMVLSAPE CHRQSGTIDV ADLYATHRLP LTRLAVLLLG DMASAEDAVQ EVFVKLWSRP
DLLQGVAAPS SYLRTAVVNR ARSVQRRRKL EREYAVQDTR DVEPAETTAL LPLEHREVME
AVQALPTRQR EVLLLRYWAD LTETEIARTL GVSRGTVKST ASRGMRAVTI RLRAGNA
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