Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8718 |
Symbol | |
ID | 8340109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 10108664 |
End bp | 10109434 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644961808 |
Product | NmrA family protein |
Protein accession | YP_003119374 |
Protein GI | 256397810 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.428087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00954025 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAACGCGA AGATCTTCGT CACCGGCGGC ACCGGCGGCC TCGGTTCGCA CACCGTCCCG CTGCTCCGCG CGGCCGGGTA CGACCTGCGG ATCCTGAGCC GGAGCGCGCG CGAGGACACC GAAGGCGTCG AGTACGTCAC CGGGGACCTG CTCGCCGGGG AGAACGGGGC GAACATCGAC GAGGCTCTGG ACGGCATCGA GACCGTCCTG CACCTGGCCG GCGCGCAGAA GGGCGACGAC ATCGCGACCC GGAACCTCGC ACAGGCCGCA GCGCGCGCCG GGGTCCGGCA CATCGTCTAC ATCTCGGTGA TCGGCGCCGA CAAGGTTCCG GTGGGGTGGC TGCGCATGAA GGCGGCGGCC GAGAAGGCGA TCGAGGAGTC GGGCGTGCCG TACACGATCC TGCGCGCCGC ACAGTTCCAC GATCTGACGC TGAAGGCGGT GCGCACCATG GCGAAGCTGC CGGTGGTCCC CAACCCGGGC GGCCTGCGGT TCCAGCCGGT GGACGCGCGC GACGTCGCCG CGCGCCTGGT CGAGCTGGTC GCCGGTCCGC CGGCCGGCCT GGTGCCCGAC ATCGCGGGTC CGGAGGTGAT CGCGATGGGC GACCTCGTGC GGTCCTATGT GAAGGCCGCC GGGAAGCACC GGATGCTGAT GCCGGTCCGA ATCCCGGGGA AGGCGGGCAA GGCTTATCGC GCCGGGGACA ACCTGACGCT GGACGGCGCG TTGGTCGCCT CCGGCTCCTG GACGGACTTC CTGGCGGCGC ACGTCGGCTG A
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Protein sequence | MNAKIFVTGG TGGLGSHTVP LLRAAGYDLR ILSRSAREDT EGVEYVTGDL LAGENGANID EALDGIETVL HLAGAQKGDD IATRNLAQAA ARAGVRHIVY ISVIGADKVP VGWLRMKAAA EKAIEESGVP YTILRAAQFH DLTLKAVRTM AKLPVVPNPG GLRFQPVDAR DVAARLVELV AGPPAGLVPD IAGPEVIAMG DLVRSYVKAA GKHRMLMPVR IPGKAGKAYR AGDNLTLDGA LVASGSWTDF LAAHVG
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