Gene Caci_8718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8718 
Symbol 
ID8340109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10108664 
End bp10109434 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content72% 
IMG OID644961808 
ProductNmrA family protein 
Protein accessionYP_003119374 
Protein GI256397810 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.428087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00954025 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACGCGA AGATCTTCGT CACCGGCGGC ACCGGCGGCC TCGGTTCGCA CACCGTCCCG 
CTGCTCCGCG CGGCCGGGTA CGACCTGCGG ATCCTGAGCC GGAGCGCGCG CGAGGACACC
GAAGGCGTCG AGTACGTCAC CGGGGACCTG CTCGCCGGGG AGAACGGGGC GAACATCGAC
GAGGCTCTGG ACGGCATCGA GACCGTCCTG CACCTGGCCG GCGCGCAGAA GGGCGACGAC
ATCGCGACCC GGAACCTCGC ACAGGCCGCA GCGCGCGCCG GGGTCCGGCA CATCGTCTAC
ATCTCGGTGA TCGGCGCCGA CAAGGTTCCG GTGGGGTGGC TGCGCATGAA GGCGGCGGCC
GAGAAGGCGA TCGAGGAGTC GGGCGTGCCG TACACGATCC TGCGCGCCGC ACAGTTCCAC
GATCTGACGC TGAAGGCGGT GCGCACCATG GCGAAGCTGC CGGTGGTCCC CAACCCGGGC
GGCCTGCGGT TCCAGCCGGT GGACGCGCGC GACGTCGCCG CGCGCCTGGT CGAGCTGGTC
GCCGGTCCGC CGGCCGGCCT GGTGCCCGAC ATCGCGGGTC CGGAGGTGAT CGCGATGGGC
GACCTCGTGC GGTCCTATGT GAAGGCCGCC GGGAAGCACC GGATGCTGAT GCCGGTCCGA
ATCCCGGGGA AGGCGGGCAA GGCTTATCGC GCCGGGGACA ACCTGACGCT GGACGGCGCG
TTGGTCGCCT CCGGCTCCTG GACGGACTTC CTGGCGGCGC ACGTCGGCTG A
 
Protein sequence
MNAKIFVTGG TGGLGSHTVP LLRAAGYDLR ILSRSAREDT EGVEYVTGDL LAGENGANID 
EALDGIETVL HLAGAQKGDD IATRNLAQAA ARAGVRHIVY ISVIGADKVP VGWLRMKAAA
EKAIEESGVP YTILRAAQFH DLTLKAVRTM AKLPVVPNPG GLRFQPVDAR DVAARLVELV
AGPPAGLVPD IAGPEVIAMG DLVRSYVKAA GKHRMLMPVR IPGKAGKAYR AGDNLTLDGA
LVASGSWTDF LAAHVG