Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8706 |
Symbol | |
ID | 8340088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 10090049 |
End bp | 10092271 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644961787 |
Product | helicase, RecD/TraA family |
Protein accession | YP_003119362 |
Protein GI | 256397798 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.671857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.279794 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGAGT CAGAGCTGGC TGGTGGTGTC GAGGTCGAGG CTGCTGTGGA GCGGCTGATC TTCGTTCGGG CGGACGAGTA CACCGTGGCG CGGCTGGCCT CTGATGAGCA CGGGAAGTTC ACGGCTGCCG GTGCGGCGCT GGCTGGGGTG CAGCCTGGTT CGGTCGTGCT GCTGGCCGGC CGGTGGGTTC AGCACGCTCG GTTTGGGTCG CAGTTGGCAG TGCGCTCGTG TGAATGCGTG CTGCCGTCAC ATATTCGCGG GATCCGGATG TACCTGGGTT CTGGCTTGAT CCGGGGGATC GGGCCGGGTC TGGCCACTGC GATCGTCGAG CACTTCGGTG CGGAGACGCT GGCGGTCATC GATGCCGAGC CGGAGCGGCT GACCGAGGTG ACCGGGATCG GCGCGGTGCG CAAGGACAAG ATCGTGGCTT CCTGGATCGG GCAGAAGATG ATCCGGGATC TGATGGTCGT TCTGCAGGGG TTCGGGATTT CGCCGCTGAT GGCCGCGAAG ATCTATACCG AGTTCGGGTC GGATTCGATG GCTGTGGTGC GCAAGGATCC GTACTTGCTC ATCGAGAAGG TGCGCGGCAT TGGCTTCGCT ATCGCGGACA AGATCGCCTT GGCGTCCGGG GTTGCGGAGC AGGATCCGAA ACGGCTGCGG GCCGCGTTGA GCGACCGGTT GGAGGCCGCT CGGCGTGACG GCGACTGCTA TATGAACCGC ACGCATCTGC TCGTGGACGC GGCGCGGCTG GTGGGGCAGG ATCGCGAGCT CGTCCGTATC GAGCTGGAGC AGTTGGCCGC GGATCGGGCG GTGATACTGG AGCCTGATCC GAACCCCGGG CTGGAGGACG TCGGTCCGCC CGCGACGGTC GTGTTCGCCA AGACGCTGCA CAACACCGAG CGCGCCCTCG CCACGGCGGT CACCAGGGTG CTGCACGCCG ATTCGGACGT CCCGGTCGCG GCCCGGCGAC GTGCGGAGAC CCTCGACGCC GACCACCCCG ACCTGCACGA GGGGCAGCGG GCAGCGGTGG GGATGGCGCT GACGCACACG GTGTCGGTGC TCACCGGCGG TCCGGGGTGC GGCAAGAGCC ACACGGTGAA GACCATCGCG CAGATCGTGA AGGCTTGCGG CGGGAGGGTG ACGCTGGCGG CGCCCACCGG CAAGGCCGCC AAGCGGCTCG CCGAGCTGAC CGGGATGCGG GCGATGACGG TCCACCGGCT GGTGGCCGAT CTCCCCGATG CCGATCCGGA CGCGTTGTTC GAGGACAGTC CGCTGATGGC CGATCTGATC GTCGTCGACG AGGCGTCCAT GCTGGACGTG TTCCTCGGCC TCAAGCTCGC CCGCCAGGTT CCGCCCGGGA CGCACCTGCT CCTGGTCGGG GACGTGGACC AGCTGCCGTC CATCGGGCCT GGCAGCGTCC TGAAAGACCT ACTGCGGGTG CCGGACGTCG CGCGCACCGA GCTGACCCAC GTGTTCCGCC AAGGCGAAGG CTCCTCCATC ACCACCAACG CCCACCTGAT CCGCGCCGGA CGGATGCCGA ACCCGCGCAC CAGCGAGTTC TGGTTCGACG AGGTCGAGGA CCCCGCGCAG GTGGCCGAGC GCATCCTGGA GATCGCCACC GGCCGCATCC CGGCGTCCCA CGGGGTCCCG CCGTCCGACG TCCAGGTCCT GGCCGCGACC CGCCGCGGCG CGACCGGCAC CGTCGAGCTC GGCCGCCGCC TCCAGGAACG CCTCAACCCC GCCGACCCGG ACAAGGCCGA GCACTGGGCC GGCACATCGG TGTTCCGTAT CGGCGACAAG GTGATGCCGA TCCGCAACGA CCCCAACAAG GGCAGCGCCG GCATCTTCAA CGGCACCACC GCCGTCGTCT CCGACCTCGA CCCCCAGTCC CGCACCGTCC AACTCCGCAC CGACGACGGC GACATCGCGG TCTACGACTT CGACGAACTC GACGACCTCC TCCACGCCTA CGCCATCAGC GTCCACCGCT CCCAAGGCAG CGAGTACCCC TACGTCGTGG CCCCCCTCAC CACCGAGACC GGCCCGCTGA TGCTCTACCG CAACCTCCTC TACACCCTCG TCACCCGCGC CCAGAAGCTC GTCGTCCTCG TGGGCCAACG CCGCGCCCTC GAGATCGCCG TTCACAACGC CGGCCGCGCC CGCAACACGG CCTTGGCGCA GCGGCTCCAG GCGGTGCTGG ACGGGACTAG CGCTTCGCGG TGA
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Protein sequence | MSESELAGGV EVEAAVERLI FVRADEYTVA RLASDEHGKF TAAGAALAGV QPGSVVLLAG RWVQHARFGS QLAVRSCECV LPSHIRGIRM YLGSGLIRGI GPGLATAIVE HFGAETLAVI DAEPERLTEV TGIGAVRKDK IVASWIGQKM IRDLMVVLQG FGISPLMAAK IYTEFGSDSM AVVRKDPYLL IEKVRGIGFA IADKIALASG VAEQDPKRLR AALSDRLEAA RRDGDCYMNR THLLVDAARL VGQDRELVRI ELEQLAADRA VILEPDPNPG LEDVGPPATV VFAKTLHNTE RALATAVTRV LHADSDVPVA ARRRAETLDA DHPDLHEGQR AAVGMALTHT VSVLTGGPGC GKSHTVKTIA QIVKACGGRV TLAAPTGKAA KRLAELTGMR AMTVHRLVAD LPDADPDALF EDSPLMADLI VVDEASMLDV FLGLKLARQV PPGTHLLLVG DVDQLPSIGP GSVLKDLLRV PDVARTELTH VFRQGEGSSI TTNAHLIRAG RMPNPRTSEF WFDEVEDPAQ VAERILEIAT GRIPASHGVP PSDVQVLAAT RRGATGTVEL GRRLQERLNP ADPDKAEHWA GTSVFRIGDK VMPIRNDPNK GSAGIFNGTT AVVSDLDPQS RTVQLRTDDG DIAVYDFDEL DDLLHAYAIS VHRSQGSEYP YVVAPLTTET GPLMLYRNLL YTLVTRAQKL VVLVGQRRAL EIAVHNAGRA RNTALAQRLQ AVLDGTSASR
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