Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8702 |
Symbol | |
ID | 8340084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 10085900 |
End bp | 10086844 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644961783 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003119358 |
Protein GI | 256397794 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.193312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCGG ACTTCAACGC GATCATGAGC GGGCGCCGCC AGCTGATCAA CCTCGGCTAT CGGCTCCTCG GCTCCCTCGC CGACGCCGAA GACGTCGTGC AGGAGACCTA TGCCCGTTGG TACGCCATGT CCGCCGAGGA ACAGCAGGCA ATCGAGGCGC CCGGCGCCTG GCTGATGACC GTCGCCAGCC GGATCTGCCT GAATCAGCTC GCCTCAGCAC GGGTCCGGCG GGAGACGTAC GTCGGGGAAT GGATCCCCGA GCCGCTGCCC GAACCCACGG AATGGATCGC GGGGCGCACC GGCACAGACC GTGCCGACCC GGCCGACCGG GTCACCCTCG ACGAGTCCGT GACCATGGCG TTCCTGGTCG TCCTGGACGC GCTGACCCCG GCCGAGCGCG TCGCGTTCGT CCTCCACGAC GTCTACGGCT ACCCCTTCGG GGAGGTCGCC GAGATCGTCG GCCGCACCCC GGCGGCGTGC CGCCAACTGG CATCCTCAGC CCGCCGCCGG ATCCGTAGCG CGCAGCCGCC GGCCAGCCGC AGCCCGAACC CGAGCCCGAA CCCAAGCCAG AGCGCCGGGC AGGCCGAGAT CGTGCGGGAC TTCAAGGCGG CGTGGGCGGC CCAGGACATC CAGGCCCTGA TCGGCCTGCT CGACCCGGAC GCCACCGCGA CCGCCGACGG CGGCGGCCTG GTCACGACCC ATGTGGAGCC GATCGTGGGC GGCGTTGAGA TCGCCCGCGC CTACGCCGAA CTCGCCGGCG TGGTACACGG GCACACGACG TTCGTGGAGT GCAGCGTCAA CGGACTGCCC GGACTCGCCG CGTTGCGGGA AGGCCGCACG GTGAGCGTCT TCGCGTTCGA GATCGCGGGG GAGCGGATCA GGCGCATCTG GGCGGTCGCG AACCCCGAGA AGATCCGTCC CTGGCAGGTC AGCCTAGGAG ACTAG
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Protein sequence | MNADFNAIMS GRRQLINLGY RLLGSLADAE DVVQETYARW YAMSAEEQQA IEAPGAWLMT VASRICLNQL ASARVRRETY VGEWIPEPLP EPTEWIAGRT GTDRADPADR VTLDESVTMA FLVVLDALTP AERVAFVLHD VYGYPFGEVA EIVGRTPAAC RQLASSARRR IRSAQPPASR SPNPSPNPSQ SAGQAEIVRD FKAAWAAQDI QALIGLLDPD ATATADGGGL VTTHVEPIVG GVEIARAYAE LAGVVHGHTT FVECSVNGLP GLAALREGRT VSVFAFEIAG ERIRRIWAVA NPEKIRPWQV SLGD
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