| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8701 |
|---|
| Symbol | |
|---|
| ID | 8340083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 10085301 |
|---|
| End bp | 10085903 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644961782 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003119357 |
|---|
| Protein GI | 256397793 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1396] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.257362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACCT CGAAGCCGCC GAAGACCGAG CAGCCGCCCA CCAGGCGGCA CGTCCTGGAC
GCCGTCGGTC CGCGCCTGCG CGAGCTGCGC CACCGCCGCG GCCTGACCCT GGCCGACCTC
GCCGAGCGGA CCGGCATCAA CGAGAGCACC CTGTCCCGCT TGGAAGGCGG CGCCCGCAAG
CCGACGCTGG AACTCCTGCT CCCGCTCGCC GAGGTCTACG CCGTCCCCCT CGACGACCTC
GTGGGCGCGC CGCGCACCGG CGACCCGCGC ATCCACTTGC GCCCGGTGAA CAGGCACGGG
ATGACGCACA TCCCGCTCAG CCAGCCCGGC GGCGTCCAGG CGCACAAGCT CCTCATCCCG
CCCCGGCCCG ACGTCGAGCC CGACCTGAAG ACCCACGAGG GATTCGAATG GCTCTACGTC
ATCAGCGGCC GGCTGCGCCT ACTGCTCGGC GACCAGGACC TGGTGCTCAA GCCGGGCGAG
GCCGCGGAGT TCGACACCCA GGTCCCGCAC TGGCTCGGCG CCGACGGCGA CCGAACCGTC
GAGCTCCTGA TCCTGTTCGG GAAGCAGGGA GAGCGCGCTC ATCTCAAGGT GCGGACAGCC
TAG
|
|---|
| Protein sequence | MPTSKPPKTE QPPTRRHVLD AVGPRLRELR HRRGLTLADL AERTGINEST LSRLEGGARK
PTLELLLPLA EVYAVPLDDL VGAPRTGDPR IHLRPVNRHG MTHIPLSQPG GVQAHKLLIP
PRPDVEPDLK THEGFEWLYV ISGRLRLLLG DQDLVLKPGE AAEFDTQVPH WLGADGDRTV
ELLILFGKQG ERAHLKVRTA
|
|---|
| |