Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8695 |
Symbol | |
ID | 8340077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 10080662 |
End bp | 10081273 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644961776 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003119351 |
Protein GI | 256397787 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.650286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCGAAAG TCGTGGACCA CGAGCGCCGA CGCGCCGAAC TCAGCGAGGC GCTGTGGCGA GTCGCCCTGC GCGACGGCTT CGACGCGGTG ACGGTGCGCT CCGTCGCGCA GGAATCCGGC TGGTCGGCAG GGGCGCTGCG GCACTACTTC CCGGACAAGG CGGAGATGGT CCTGTTCGCC ATGGACCTGG TCGTCGGCAT GGCACAGGAC CGGGTCCAGG AACTTCACGC GGGTGGCGGC GACGTGCCCA CGGCCGAGGC GCTCCAGCAG CACCTGGAGC AGCTGCTCCC GCTGGATGCG CCCCGGCGCG TCGAGTCGGA GGTGTGGTTC GCGCTGGTCG CGCTGGCACG CTCCGACGCC CGCCTCGCTC GGCGACGGCA GGAGATCGAC GACACGATCA GGGGATCGGT GGAGAGCGTC GTGATGGTGC TGGACCAGAT CGGGCGCCTG GAGCACGGCC GGGATCAGGA CCTGGAGACC CGTCGGCTGC ACGCGCTGCT CGACGGACTC GTCATCCAGC TGACCGCCGA CCCGCCGCGG CTGACAGTGG ACGAAGCACG GGCGATCATG GCGAGGCATC TGGCGGATCT GGCCGGGCAG CGCGCCGACT AG
|
Protein sequence | MPKVVDHERR RAELSEALWR VALRDGFDAV TVRSVAQESG WSAGALRHYF PDKAEMVLFA MDLVVGMAQD RVQELHAGGG DVPTAEALQQ HLEQLLPLDA PRRVESEVWF ALVALARSDA RLARRRQEID DTIRGSVESV VMVLDQIGRL EHGRDQDLET RRLHALLDGL VIQLTADPPR LTVDEARAIM ARHLADLAGQ RAD
|
| |