Gene Caci_8695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8695 
Symbol 
ID8340077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10080662 
End bp10081273 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content71% 
IMG OID644961776 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003119351 
Protein GI256397787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.650286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAAAG TCGTGGACCA CGAGCGCCGA CGCGCCGAAC TCAGCGAGGC GCTGTGGCGA 
GTCGCCCTGC GCGACGGCTT CGACGCGGTG ACGGTGCGCT CCGTCGCGCA GGAATCCGGC
TGGTCGGCAG GGGCGCTGCG GCACTACTTC CCGGACAAGG CGGAGATGGT CCTGTTCGCC
ATGGACCTGG TCGTCGGCAT GGCACAGGAC CGGGTCCAGG AACTTCACGC GGGTGGCGGC
GACGTGCCCA CGGCCGAGGC GCTCCAGCAG CACCTGGAGC AGCTGCTCCC GCTGGATGCG
CCCCGGCGCG TCGAGTCGGA GGTGTGGTTC GCGCTGGTCG CGCTGGCACG CTCCGACGCC
CGCCTCGCTC GGCGACGGCA GGAGATCGAC GACACGATCA GGGGATCGGT GGAGAGCGTC
GTGATGGTGC TGGACCAGAT CGGGCGCCTG GAGCACGGCC GGGATCAGGA CCTGGAGACC
CGTCGGCTGC ACGCGCTGCT CGACGGACTC GTCATCCAGC TGACCGCCGA CCCGCCGCGG
CTGACAGTGG ACGAAGCACG GGCGATCATG GCGAGGCATC TGGCGGATCT GGCCGGGCAG
CGCGCCGACT AG
 
Protein sequence
MPKVVDHERR RAELSEALWR VALRDGFDAV TVRSVAQESG WSAGALRHYF PDKAEMVLFA 
MDLVVGMAQD RVQELHAGGG DVPTAEALQQ HLEQLLPLDA PRRVESEVWF ALVALARSDA
RLARRRQEID DTIRGSVESV VMVLDQIGRL EHGRDQDLET RRLHALLDGL VIQLTADPPR
LTVDEARAIM ARHLADLAGQ RAD