Gene Caci_8681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8681 
Symbol 
ID8340063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10067872 
End bp10068783 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content73% 
IMG OID644961762 
ProductAldose 1-epimerase 
Protein accessionYP_003119337 
Protein GI256397773 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.626175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACT TCCTCACCGG CGAGCAATAC GAGCTCACCG CCGGTCCCTA CCGCGCGGTG 
GTCACGGAAG AAGGCGCCGG CCTCAGAGAG CTGACCCACG ACGGCGAACC CCTCGTCCTG
TCCTATGACG CCGACGAGCC GGCGCCCGCG GCGTTCGGGC AGCTCCTCAT CCCCTGGCCG
AACCGCGTGG ACCGCGGCCG CTACACCTTC GACGGCCGCG ACCACCAGCT CGACCTGTCC
GAGCCGGAGC TGGACAACGC CATCCACGGC CTGACGCGCT GGGCCGCCTG GTCCCCGGTC
GAGCAGCGCC CGGACACCGT CGTGCTGGCC TGCTCGCTGC ACGGATCGAC CGGCTACCCG
TTCCGCCTCG ACGTCCAGGT GGAGTACCGC CTGGACGCCG AGGACGGCCT GACGGTCACG
CTCCTCGCCG CCAACCCCGG CTCCCGCGCG CTGCCCTACG CGCACGGGAT GCACCCCTAC
CTCACCGTGG GCGAACCGCT GGACGCCTGC ACCGTCCGGC TCCCCGGCAG CCTCTACCAG
CCGGTGGACG ACCGGATGAT CCCGATCGGC GCCCCGAAGG ACGTCGCGGG CAGCGAATAC
GACCTGCGCG CCGGCCGGGT GCTCGGCGAC CAGAAGATCG ACATCGCCTT CACCGGTCTG
GCACGCGGCG CCGACGGACT CGCGCGCGTC CGTCTGACCG GCAGCCGGCG CAGCACCTCC
TTCTGGCTGG ACCAGGCGCA GCCGTGGCTG GAGATCTACA CCGCCGACCA GGTCCCGCCG
GATCAGCGGC GGCGCGGGCT GGGCTGCGAG CCGATGACCG GCCCGCCGAA CGCGTTCGCC
AGCGGCGTGG ACCTCATCCG GCTGGAACCG GGTGCCGAGT ACCGAGGATC GTGGGGGATC
GCGGCGGGCT GA
 
Protein sequence
MADFLTGEQY ELTAGPYRAV VTEEGAGLRE LTHDGEPLVL SYDADEPAPA AFGQLLIPWP 
NRVDRGRYTF DGRDHQLDLS EPELDNAIHG LTRWAAWSPV EQRPDTVVLA CSLHGSTGYP
FRLDVQVEYR LDAEDGLTVT LLAANPGSRA LPYAHGMHPY LTVGEPLDAC TVRLPGSLYQ
PVDDRMIPIG APKDVAGSEY DLRAGRVLGD QKIDIAFTGL ARGADGLARV RLTGSRRSTS
FWLDQAQPWL EIYTADQVPP DQRRRGLGCE PMTGPPNAFA SGVDLIRLEP GAEYRGSWGI
AAG