| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8666 |
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| Symbol | |
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| ID | 8340048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 10048865 |
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| End bp | 10050079 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644961747 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003119322 |
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| Protein GI | 256397758 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAC CGGCGATCGA GGACCTGCTC CGCGAGCTGA CACCGCAGGT CCTCGGCGCT
CTGGTCCGCC GCTACGGACG ATTCGAGGGC TGCGAGGACG CCGTACAGGA GGCGGTCCTG
GCCGCCTCCG TCCAGTGGCC GGACGAAGGC GTGCCGGAGA ATCCGCGCGG CTGGCTGACC
ACGGTCGCCT CCCGCCGGCT CATCGACCAG GTACGCAGCG ACTCCGCACG ACGCGAGCGG
GAAGAGCAGG TCTGGGCGTC GGACGTGGTG CCGGACGAGG TTCCGGACAC CGACGACACC
CTGGTCCTGC TCTTCCTGTG CTGCCACCCG ACGCTCACCG CCGCGTCGCA GACCGCGCTG
ACGCTGCGCG CCGTCGGCGG CCTGACCACC GCCGAGATCG CCCGCGCCTT CCTGGTCCCG
GAGGCCACGC TGGCGGCCCG GGTCAGCCGC GCCAAGCAGC GGATCAAGAC CGCGGGGAGC
TCCTTCGAGC TGCCGGCCGG TCCCGAGCGC GAGGAACGGC TGCAGGTCGT GCTGCACGTG
CTCTATCTGA TCTTCAACGA GGGTTACACC GCGTCCTCCG GCACAGAACT GGACCGCGTG
GACCTCGCGA CCGAGGCGAT CCGGCTGACC AGGATGGTCT ACGCGCAGCT GCCCGACGAC
GGCGAAGTCG CCGGGCTGTT GGCGCTCATG CTGCTCACGC ACTCCCGGCG TGAAGCCCGC
ACGACCGCGC AGGGCGACTT GATCCCGCTG GACGAGCAGG ACCGCGCGAA GTGGGACGCC
GAGCTGATCG CCGAGGGACT GGAGCTGGCG AAGACCTCGC TGGCCGGCAC GGAGCTGGGA
CCGTACCAAC TGCAGGCGGC CATAGCCGCC ACGCACGCCG TCGCCACCGA CGCCGCGGAC
ACCGACTGGC GCCAGATCCA CACGCTGTAC CTGGTCCTGG AACGCATCGC GCCGAACCCG
ATGGTCACCC TGAACCGCGC CGTCGCGCTC GCCGAGATCG AGGGACCGCA AGCCGGGCTC
GCGGTGCTGG CGACGTTGGA CAGCGACGAG CGGATGGCGA AGCACCATCG GCTCTTGTCC
GTGCGGGCAC ACCTGCTGGA GATGGCCGGG GACACCGACG CCGCGTACGA GAACTACCGG
CGCGCCGCCA AGGCGACCGC GAGTCTGGCC GAGCAACGGC ATCTGGAATC CCGAGCCAAG
AAGCTGCGGC CCTGA
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| Protein sequence | MTAPAIEDLL RELTPQVLGA LVRRYGRFEG CEDAVQEAVL AASVQWPDEG VPENPRGWLT
TVASRRLIDQ VRSDSARRER EEQVWASDVV PDEVPDTDDT LVLLFLCCHP TLTAASQTAL
TLRAVGGLTT AEIARAFLVP EATLAARVSR AKQRIKTAGS SFELPAGPER EERLQVVLHV
LYLIFNEGYT ASSGTELDRV DLATEAIRLT RMVYAQLPDD GEVAGLLALM LLTHSRREAR
TTAQGDLIPL DEQDRAKWDA ELIAEGLELA KTSLAGTELG PYQLQAAIAA THAVATDAAD
TDWRQIHTLY LVLERIAPNP MVTLNRAVAL AEIEGPQAGL AVLATLDSDE RMAKHHRLLS
VRAHLLEMAG DTDAAYENYR RAAKATASLA EQRHLESRAK KLRP
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