Gene Caci_8655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8655 
Symbol 
ID8340037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10040333 
End bp10041385 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content71% 
IMG OID644961737 
Productankyrin repeat-containing protein 
Protein accessionYP_003119312 
Protein GI256397748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCGC GCATGGCGAG GAAGAAGAAG CGGCTGCCGA AGGATTTCGA CACCACGCTC 
CGGTCCGGCG ACCTCGACGC GATGAAGGCG GTTTTCGCGA CCACCGAGCT GGACGCCCGC
CAAGGCGCCG ACGGCCCGAC CGCCCTCGGT GTGCGCGCCA TCCCGCCGGA GCTGGTCGCC
TGGCTGGTCG CCGAGGGCGC GGACGTCGAA GCCACCGACG CCTTCCACCG CACCGCGCTG
TGGCAGCACG CGTACATGGG CAACGACGTG GTCGTCGCGG CTCTGCTGGA CGCCGGCGCC
GACATCCAGG CGCCGAAGCA GCCGGCACTG CACGCGGCGG CGCTCGGCAT CATGCCCACG
ACCGTGCGCC TCCTGTTCGA GCGCGGCGCG GACCGCCTCG TCCTCACCGG CGGCGCGCTG
CAGTCCGGCT TGCAGCGCTG CACCAACAGC CAACTGCCGC GGATGGCAGA GGTCGCCGAG
GCCTTCCTGC AGCACGGAAC CCCCATCACC GCCACGATGC GCGAACGCGT CGCGGCGATC
GGTAAGAACT TCGAGTTCTT CCGCGCCGAC TTCAACCCGG ACCACCTGGC CGAGACCGAA
GCCGGCCTGA ACCGCCTCTA CGACCTGTTC GACGTCGCGC CAGCCGTCCG GCGCCGCACC
CACGACGGCA CCTCCCCGAT CACCGCGACC GCCACCGCCT GGGACGACCG GCACCAAGAA
CTGTGGGACC TCCTGGTCCC CGGCAAGGGC CCAGCCGCCA CAGCCCAGGG CGAAGCCATC
CGCATCACCG GCCGTCTGGA CCATGAAGTC CTCGGCAACG GCGGCATGAA CTGGGACCTC
GACTTCCGCC ACATGGTCCG AGCCCTGCCA ACCCTCCTCG CCTCTGGCAT CCCCCTCCCC
GAATCCCAGC TCACCGAGGC AACCACCCTC GCCCAGAACT TCCGCCGCAA CAGCCCCGAG
GAACACATCC AGCGCCTCAG CGAACTGGCC GTGACCTGGG TCCTCGCCAA CCCCGACCCG
CTGCCGGTGC CGGAGCCCGC CTACGCGCGC TGA
 
Protein sequence
MLARMARKKK RLPKDFDTTL RSGDLDAMKA VFATTELDAR QGADGPTALG VRAIPPELVA 
WLVAEGADVE ATDAFHRTAL WQHAYMGNDV VVAALLDAGA DIQAPKQPAL HAAALGIMPT
TVRLLFERGA DRLVLTGGAL QSGLQRCTNS QLPRMAEVAE AFLQHGTPIT ATMRERVAAI
GKNFEFFRAD FNPDHLAETE AGLNRLYDLF DVAPAVRRRT HDGTSPITAT ATAWDDRHQE
LWDLLVPGKG PAATAQGEAI RITGRLDHEV LGNGGMNWDL DFRHMVRALP TLLASGIPLP
ESQLTEATTL AQNFRRNSPE EHIQRLSELA VTWVLANPDP LPVPEPAYAR