Gene Caci_8642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8642 
Symbol 
ID8340024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10025160 
End bp10026290 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content70% 
IMG OID644961724 
ProductEpoxide hydrolase domain protein 
Protein accessionYP_003119299 
Protein GI256397735 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.187531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.860873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG AGATCCAGCC CTTCCAGATC GCCATCCCCC AGCCAGACCT CGACGACCTC 
CACGCACGGC TGACCAATGC CCGCTGGGCC GCGTCCGTCC CCGGAGCGGG CTGGGAGCGC
GGGGTCCCCG TCGACTACCT GAAGGAGCTC GCGGAGTACT GGCGCAGCGG ATTCGACTGG
CGGGCGCAGG AGAAGGCGCT CAACGCCTAC CCGCAGTTCG TCACCGAGAT CGACGGCCAG
CGGATCCACT TCCTGCACAT CCGCTCCGCG CGCCCCGACG CCAAGCCGCT GCTGATCACA
CACGGCTTCC CCAGCTCCGT CGCCGAATTC ATGACCTTGA TCGAGCCGCT GGTCGCCCCG
GAAAGCGACG AGGACCAAGC GTTCCACGTC ATCGCGCCCT CCCTTCCCGG CTACGGCTTC
TCGACCCCGC TCGCCGCGCA GGGCTGGACG CTCAGCCGGA CGGCGCGCGC CTGGATCGAG
CTGATGCGGC GGCTCGGCTA CGACCGCTAC GGCGTCCACG GCGGCGACGT CGGCAGCGGC
GTGGCGGGGC TGGTCGCGGG CTACGCCGCC GACCACGTCA CCGGCGTGCA CGTCACCACC
GACCCGCAGA CGGCGGCCAA CGTCGCCACC TTCCTGCCCG GCCTCGCCGA CCGCCTGGAC
GCCACAGACC CCGTCGACGC GCTGGCACTG GAGCGGATGA ACGCGTTCCG CAAGGAGGGA
TCGGGCTACC TCGCGATCCA GAACAGCCGC CCCCAGACCA TCGGCTACGG CCTGGTCGAC
TCCCCGATCC TGCAACTGGC GTGGATCGCG GAGAAGTTCG AGCTATGGAC CGACCTGCCG
ATCGACCGCG ACCAGCTGCT GACCACGGTG AGCCTGTTCT GGTTCACCGG CGCCGGCGCC
TCCGCGGCCC ACACGCTCTA CGACCAGTTC CACTCCTCCG ACTGGGGCGC GCCGTCCCCA
GTGCCGCACG GCTACGCGGT GTTCGGCGCG GACGCGACGG TGCGCAAGCT GGTCCCCGCC
GAGCAGGACG CGCATTGGAG CGAGTTCGAG CGCGGGCAGC ACTTCCCGGC GATGGAGTGC
CCTGATGTCC TCGCGGCGGA TCTGCGGGAT TTCTTCGGGC CGCTGAGCTG A
 
Protein sequence
MTTEIQPFQI AIPQPDLDDL HARLTNARWA ASVPGAGWER GVPVDYLKEL AEYWRSGFDW 
RAQEKALNAY PQFVTEIDGQ RIHFLHIRSA RPDAKPLLIT HGFPSSVAEF MTLIEPLVAP
ESDEDQAFHV IAPSLPGYGF STPLAAQGWT LSRTARAWIE LMRRLGYDRY GVHGGDVGSG
VAGLVAGYAA DHVTGVHVTT DPQTAANVAT FLPGLADRLD ATDPVDALAL ERMNAFRKEG
SGYLAIQNSR PQTIGYGLVD SPILQLAWIA EKFELWTDLP IDRDQLLTTV SLFWFTGAGA
SAAHTLYDQF HSSDWGAPSP VPHGYAVFGA DATVRKLVPA EQDAHWSEFE RGQHFPAMEC
PDVLAADLRD FFGPLS