Gene Caci_8626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8626 
Symbol 
ID8340008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10002105 
End bp10003181 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content67% 
IMG OID644961708 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_003119283 
Protein GI256397719 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.276752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.685734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGAACA AGTTCGCTGG GGCGGCGGTC GCCGGGTCGC TGCTGCTGCT GACCGGATGC 
GCGAGTACAG CTGTCAGCAG CGAAGCCGCC GCTCCCAGCC CGACCTCGTC TGCTGTCGAG
ACTCCGACAG CGGTGTCCTC GGCTGCGACC ACCACGCCGT CGGCAGCGAC CACCACGCCG
TCGGCCGCGC CCACGACGGC GTCCTCGCCG ACGACGGCGT CCTCGACCGC CCGTGGGCCG
AGCACCGCGG CTGCGAAGCC GAGCACGCCT GCCGCGCCGA CCACGTCCCC GAGCCAGTCG
ACCGGGACGG TCACGCTGCC CTCCATCTCC TCGGTGTCAC CGAAGGACGG CTCTAAGGTC
GGTGTCGCGA TGCCGGTCCG CGTCGACTTC GCCTCTACGG TGCCGTCGAC GAACCGCGCG
GCGATCGAGA AGTCGATGAA GGTCACGACG ACGCCGCACG TTGACGGCGC GTGGTCCTGG
CTCGACTCGA ACACCGTCGA CTTCCGCCCG CAGGGCTTCT GGCCGGCCGG CACCAAGGTC
TCCGTCCAGT TCGGCTCGAC CGACCGCAAG CTGGACTTCA CCATCGGCGC CGACCACGAG
ATCGTCGTCA ACGCGGCGAC GCACAAGATG AACGTCTACG AGAACGGCGC GTTGGTCAAG
ACACTGGCCA GCGGCACGGG CAAGACGGGC TGGGAAACCT ACAGCGGCAC GATGGCCGTC
GAGGACATGG TCCCGCACAT CGAGATGACC TCGTGCGCCA TCGGCATCCA ATGCACCAAG
GGCGGGCCAG GCTGGTACGA CCTCCAGACG TACCATGACC TGCAACTCAC CGACAGCGGC
ACCTTCATCC ACTCAGCATG GTGGGACGAT TCACTGGGCA AGGCGAACGT CTCACACGGC
TGCATCCACC TCTCGGAAGC CGACGCAGCA GTGCTGTGGA ACATTGTCCA GGTCGGGGAC
CCGGTGACGG TCAAGGGCAC CAGCAAGAAG GTGAGCCAGT CCAACGGCTA CGCCGACTAC
ACGCTGTCGT GGTCGCAATG GCTGTCCAAC TCCGCCACCG GCATCCAGGT GTTCTGA
 
Protein sequence
MGNKFAGAAV AGSLLLLTGC ASTAVSSEAA APSPTSSAVE TPTAVSSAAT TTPSAATTTP 
SAAPTTASSP TTASSTARGP STAAAKPSTP AAPTTSPSQS TGTVTLPSIS SVSPKDGSKV
GVAMPVRVDF ASTVPSTNRA AIEKSMKVTT TPHVDGAWSW LDSNTVDFRP QGFWPAGTKV
SVQFGSTDRK LDFTIGADHE IVVNAATHKM NVYENGALVK TLASGTGKTG WETYSGTMAV
EDMVPHIEMT SCAIGIQCTK GGPGWYDLQT YHDLQLTDSG TFIHSAWWDD SLGKANVSHG
CIHLSEADAA VLWNIVQVGD PVTVKGTSKK VSQSNGYADY TLSWSQWLSN SATGIQVF