| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8617 |
|---|
| Symbol | |
|---|
| ID | 8339999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9982738 |
|---|
| End bp | 9983661 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644961701 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003119276 |
|---|
| Protein GI | 256397712 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00420025 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.408373 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCTG TCGTTGACCG GGTTACCGGG AAAAGGCACG TTGCGCCGAT TAGCGACGCG
ATCGTCGAGA AGGACTTTTA TACGAGCATC GACAACGACG GTGCGTTCGA TGGACGATCC
GATCACTTGC TGACGTGGAT CGAGGGGAAC GTTGCGCCGG TCATGGAGCG CATCGTGCGG
CTCGGGTTGT TCCAACGTTT CCCGCTGCAA CCTGTTGACG TGGGAAACAT CTGCCTGTTC
CTGGCCTTTC AGATAACCCG GGGTCGCGCC GCGCGTCGCA TGGCCGAGCT GATGGGCGAC
ACCTACATGC ACATCATGGT GCCGAAGGAC ATGGATGAGG ATCAGGCCGT AGCCTGGCTG
CGCACCGGCG GCCACGAGCC GACGACCGAG ACGATCGCGC AGGTGCGAGC TATAAGCGAG
ATTGTTGACG ACATCGAGTT CGTCCCGGAC CCCAACGCGC ACATCGGCAC GATGGGCCGG
GTGGCCTTGA GCTTGTTCGA GGAACTCATC TGTCGTCCCT TGTACCTGGC GGTGTATGAC
GAGCCCAGCC TCTTGACCTG CGATGAACCG GTCGTGTTGT ACTTCGATGA GGGCCGGCCG
CTGGGCCACC GGGCCGGGGT GGCCTTGGCA GATCAGATCT GGTTTCCGAT GAGCCCGCGG
CATCTGCTTA TCCTTGGGCG GGGTGATCGT TACGGGCCGC CACGTCGACT CGACGCCGAT
CCTGCGAGCG TTGACTATGT CAACTTACGA ATCGCTGCCA ACGCTTACGA GTCGATCCTC
ATGCACCCAG ACCAAGACCA TCTGGCTGGG ATCGAACTCC CGCCACCGGG CCCGCTGTAC
ACAGTCAACG CACCTGGCTT TCCGGCCCTT GAGCGTCACA ACCACGCACC GCAGCGAAGG
CGTACCCAGC GCCGCCGACG ATGA
|
|---|
| Protein sequence | MIAVVDRVTG KRHVAPISDA IVEKDFYTSI DNDGAFDGRS DHLLTWIEGN VAPVMERIVR
LGLFQRFPLQ PVDVGNICLF LAFQITRGRA ARRMAELMGD TYMHIMVPKD MDEDQAVAWL
RTGGHEPTTE TIAQVRAISE IVDDIEFVPD PNAHIGTMGR VALSLFEELI CRPLYLAVYD
EPSLLTCDEP VVLYFDEGRP LGHRAGVALA DQIWFPMSPR HLLILGRGDR YGPPRRLDAD
PASVDYVNLR IAANAYESIL MHPDQDHLAG IELPPPGPLY TVNAPGFPAL ERHNHAPQRR
RTQRRRR
|
|---|
| |