Gene Caci_8590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8590 
Symbol 
ID8339972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9960669 
End bp9961202 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content67% 
IMG OID644961675 
Productflavoprotein 
Protein accessionYP_003119250 
Protein GI256397686 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0388275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.325413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGAG TTCTCTATGT GATCCCGTGC GCGGCAGGTC CTGCACCGAT GGTTGACCGG 
CTGGTGAAGC TGGCTCAGGC CGGCGGATGG GATGTGTGGC TGGCCCCGAC CCCGAGCGCG
ATGGACTTCC TCGACGTGCC CAGTTTGGAG GCGCTGACGG GCCACCCGAT TCGGGCTCGA
TACCGACAGC CGGGAGAGCT CGGGAAGTTG CCGATGGCCG ACGCGGTGAT CGTGGCACCT
GCGACCTACA ACACGATCAA CAAGTGGGCG GCGGGCATCG CGGATACGCA CGCCCTCGGG
TTACTGGCGG AGCTGACGCC GTCCGGTATC CCGATCGCCG TGCTGCCCTT CGTCAACGCC
TCCCTCGCGG CGAACCGGGT GTTCGGGCGT TCGGTGGAGT CCCTGAGAGA GGAGGGTGTC
ACGGTGCTCG TAGGCGACGG TGGGTTCATG CCACATCCGG CAGGGACCGG TGGTGATCGG
CTGGAGACGT TCCCGTGGGA GCTGGCGTTT GAGGCTGTTG GGGGCCCACG CTGA
 
Protein sequence
MTRVLYVIPC AAGPAPMVDR LVKLAQAGGW DVWLAPTPSA MDFLDVPSLE ALTGHPIRAR 
YRQPGELGKL PMADAVIVAP ATYNTINKWA AGIADTHALG LLAELTPSGI PIAVLPFVNA
SLAANRVFGR SVESLREEGV TVLVGDGGFM PHPAGTGGDR LETFPWELAF EAVGGPR