Gene Caci_8581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8581 
Symbol 
ID8339963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9953148 
End bp9954026 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content70% 
IMG OID644961666 
Producthypothetical protein 
Protein accessionYP_003119241 
Protein GI256397677 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.218892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.386277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGATCC GAACCCCGAC CCGGCCGATC TCCGACGCCA CCAGGGCCGG CGACCGGCTG 
ACCGAACGAG ACGCCGAGGT GCTGCGACTG CTGGCTGAAC ACCAGGTGCT CACCATCGGA
CAGCTCGCAG TGGCGCTGTT CCCTGACGTA CGAAAGTGCC GGAGCCGCGT GGCGGTGCTG
CGGGCGCTCA AGCTCGTCGA GACCTTCCGA CCTCCGCTGC AGCGCGGGTC GTCGCAGGCT
CACTGCGTCG CCACGGCTCG GACCCTCGAC CTGCTCTCCA CCGATGCCGA CGGTTCTCGG
CTGCGACGCC GATCGACGTA CGACGCAGCC GCCATCGCGC TACGCCCGGA CCTCGGGCAC
CTGCGAGGTG TCAACGAGGT GTTCTGCCAG CTGCTCGGCT ACGCCCGACA AACCCCCGGC
GCCATGCTCG AGACCTGGCG CTCCGAACGC GCCACCGCCC GCGCGCTCGG AACGCGACTG
CGGCCGGACG GCTTCGGCCG ATGGCGGCAA AACGACGCCA AGTGCGAGTT CTTCCTCGAA
TACGACACCG GCACCGAACC CCACGCACGG CTCCTCGCCA AGCTCACCGG ATACGCCGAC
CTCGCTGAAT CCGCGGGCGT CTCGTGTCCT GTCCTGTTCT GGCTGCCGAA CGCACATCGC
GAGAACCACT TTCACCGGCG CCTCGTCGAC CATCCGCCAC GCGTACCGGT CGCCACGGCG
TACGGCGATC CGTCCCGGAC CGATCCGTCC CGGACCGGTC CGGCTGGTCC GACCTGGCGT
CCGGCCTGGT CCCCGTCCTC ACAACTCCCC CTCGCAGCCC TCGGCGCCTC CGCCGCCCAA
CACCTCGGCA TCCCGCAGAG CTCACACATC CTGCTCTAG
 
Protein sequence
MTIRTPTRPI SDATRAGDRL TERDAEVLRL LAEHQVLTIG QLAVALFPDV RKCRSRVAVL 
RALKLVETFR PPLQRGSSQA HCVATARTLD LLSTDADGSR LRRRSTYDAA AIALRPDLGH
LRGVNEVFCQ LLGYARQTPG AMLETWRSER ATARALGTRL RPDGFGRWRQ NDAKCEFFLE
YDTGTEPHAR LLAKLTGYAD LAESAGVSCP VLFWLPNAHR ENHFHRRLVD HPPRVPVATA
YGDPSRTDPS RTGPAGPTWR PAWSPSSQLP LAALGASAAQ HLGIPQSSHI LL