Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8581 |
Symbol | |
ID | 8339963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9953148 |
End bp | 9954026 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644961666 |
Product | hypothetical protein |
Protein accession | YP_003119241 |
Protein GI | 256397677 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.218892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.386277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGATCC GAACCCCGAC CCGGCCGATC TCCGACGCCA CCAGGGCCGG CGACCGGCTG ACCGAACGAG ACGCCGAGGT GCTGCGACTG CTGGCTGAAC ACCAGGTGCT CACCATCGGA CAGCTCGCAG TGGCGCTGTT CCCTGACGTA CGAAAGTGCC GGAGCCGCGT GGCGGTGCTG CGGGCGCTCA AGCTCGTCGA GACCTTCCGA CCTCCGCTGC AGCGCGGGTC GTCGCAGGCT CACTGCGTCG CCACGGCTCG GACCCTCGAC CTGCTCTCCA CCGATGCCGA CGGTTCTCGG CTGCGACGCC GATCGACGTA CGACGCAGCC GCCATCGCGC TACGCCCGGA CCTCGGGCAC CTGCGAGGTG TCAACGAGGT GTTCTGCCAG CTGCTCGGCT ACGCCCGACA AACCCCCGGC GCCATGCTCG AGACCTGGCG CTCCGAACGC GCCACCGCCC GCGCGCTCGG AACGCGACTG CGGCCGGACG GCTTCGGCCG ATGGCGGCAA AACGACGCCA AGTGCGAGTT CTTCCTCGAA TACGACACCG GCACCGAACC CCACGCACGG CTCCTCGCCA AGCTCACCGG ATACGCCGAC CTCGCTGAAT CCGCGGGCGT CTCGTGTCCT GTCCTGTTCT GGCTGCCGAA CGCACATCGC GAGAACCACT TTCACCGGCG CCTCGTCGAC CATCCGCCAC GCGTACCGGT CGCCACGGCG TACGGCGATC CGTCCCGGAC CGATCCGTCC CGGACCGGTC CGGCTGGTCC GACCTGGCGT CCGGCCTGGT CCCCGTCCTC ACAACTCCCC CTCGCAGCCC TCGGCGCCTC CGCCGCCCAA CACCTCGGCA TCCCGCAGAG CTCACACATC CTGCTCTAG
|
Protein sequence | MTIRTPTRPI SDATRAGDRL TERDAEVLRL LAEHQVLTIG QLAVALFPDV RKCRSRVAVL RALKLVETFR PPLQRGSSQA HCVATARTLD LLSTDADGSR LRRRSTYDAA AIALRPDLGH LRGVNEVFCQ LLGYARQTPG AMLETWRSER ATARALGTRL RPDGFGRWRQ NDAKCEFFLE YDTGTEPHAR LLAKLTGYAD LAESAGVSCP VLFWLPNAHR ENHFHRRLVD HPPRVPVATA YGDPSRTDPS RTGPAGPTWR PAWSPSSQLP LAALGASAAQ HLGIPQSSHI LL
|
| |