Gene Caci_8577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8577 
Symbol 
ID8339959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9946653 
End bp9948098 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content67% 
IMG OID644961662 
Producthypothetical protein 
Protein accessionYP_003119237 
Protein GI256397673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.431324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.276743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCGT CGCCGACCCT AGGACCCGCC AGCTCCAAAA GCGCGGACCC GTCCTGGTGG 
GACATCCCAG GCCAGATCGA GAAGGCCATC GATACCTGGC TCGGCGATCT CGTGAAGTCC
GCACTCAAGC CGGTGCTCCC GTTTGTCGCC ACGTCGTTGC TGTCGAGCCC GAACCTGAGC
AGCGGTCGCA TCGCAAGTAT CTGGACTTCC GTCCTGATCC TCTCGAACAC GCTCTACGTG
CTCTTCATCC TGGCCGGCGG CATTCTCGTC ATGACGCACG GGACGCTTCA GACGCGGCAT
GAGCTCAAGG AGATCGCGCC TCGGCTGGTC ATCGGGATGG TCGCTTCGAA CGCGTCGCTG
TGGTTGATCT GCCAGTCCGT GTCTCTGGGC AACGCGCTTG TCGCGGCCTT GATGAACGGG
AACCTCTCGT CCGAGGGCAT CGGGTCCAGG CTGACGAGCC TCATCGTCTA CAACGTCTTC
CTCCCCGACG GGGTCGGAGA GGTGTTCCTC GTCATCATCG GCGGCGCCAT CGCGGTGTTG
GGCGTCGCGC TGGTCGTCAC AGATCTGGTG CGCGCAACCG TGCTGATGGT GTTGACGGCC
GGCGCCCCGC TCGCGCTCGC CTGCCTTGCC CACCCCCAGA CGGAGGGGCT GGCCAAGCTG
TGGTGGCGGG CCATCCTGGG GTGCCTGGCA ACGCAGGTCC TTCAGGCGCT GGTCCTGATC
ATCTGCTTAC AGGTCTTCTT CGACCCGCAG GCGGACAACG TTCTTGGCCT CCCGACTCGC
GGCGGCCTGA CCGACCTGCT TATCTGCCTG GTCCTGTTCT TCATGCTGAT CAAGATCCCG
ATCTGGACGA GCCGGGTAGT TCTCCAGCGC GGGGCGCTCG GCCAGACGCG GATCACGGGC
TTGGCGCGCA GCTACCTGCA ATACCGGGCG TTCGGCGCCA TCCCGAGTCG CTTCGACGTC
GGCCGTCGCC GATCTCGACC CGGCGGCGGC ACCGGACCGC TTCCGCCTCC GCCGACCTCA
CCGGGAGGTC CGGGGCGTGG CCCTCGGCCA TGTACAGGGC CGGGGCACGG CAAGTTCGGT
CCGCTGCCAA TCCTGCACGG AGGGCCGCGG GGCCCGAGTT TCTCGTCTCG GCCCCGCGCC
ACCGAACCGA GAGAAGCCAC CGTCACTCCT CGACCGGCTG AGGAGCCGAC TCGGAGCCCA
CGAGCCCAAC CGACACCGCC TCGGCCTCTC ATCACCCCTG CAAAGCGCCC GATCTCGCAC
ACGACGCGGT CGCCCAATCC GCCGCAGTCA AAGACACCGC CCGTTCGGGA CAGGCCAACC
CAGGCGGTTC CTCAGCCTCC TTCCCCGAGT CCGGTGGCGA AGCACTTGGC GCCACCGACT
CCACCTCGTG CACCACGGCC TACAAATAGC CACAAACCCA AGCTCAGACC CCTCAGCGAA
AGGTGA
 
Protein sequence
MTPSPTLGPA SSKSADPSWW DIPGQIEKAI DTWLGDLVKS ALKPVLPFVA TSLLSSPNLS 
SGRIASIWTS VLILSNTLYV LFILAGGILV MTHGTLQTRH ELKEIAPRLV IGMVASNASL
WLICQSVSLG NALVAALMNG NLSSEGIGSR LTSLIVYNVF LPDGVGEVFL VIIGGAIAVL
GVALVVTDLV RATVLMVLTA GAPLALACLA HPQTEGLAKL WWRAILGCLA TQVLQALVLI
ICLQVFFDPQ ADNVLGLPTR GGLTDLLICL VLFFMLIKIP IWTSRVVLQR GALGQTRITG
LARSYLQYRA FGAIPSRFDV GRRRSRPGGG TGPLPPPPTS PGGPGRGPRP CTGPGHGKFG
PLPILHGGPR GPSFSSRPRA TEPREATVTP RPAEEPTRSP RAQPTPPRPL ITPAKRPISH
TTRSPNPPQS KTPPVRDRPT QAVPQPPSPS PVAKHLAPPT PPRAPRPTNS HKPKLRPLSE
R