Gene Caci_8570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8570 
Symbol 
ID8339951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9939572 
End bp9940045 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content68% 
IMG OID644961654 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_003119230 
Protein GI256397666 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00354903 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0468884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCG CCCTGGCCGA AGCCACCGCC GCCGAATCCA CGGGCGACGT CCCCATCGGC 
GCCGTCATCC TCGACCCCAC CGGCACCGTG ATCGCCCAAG GCCGCAACAC CCGCGAAGCC
GAAGGCGACC CCACCGGCCA CGCCGAAATA GTCGCCATCC GCTCAGCAGC CCACACCCTC
CACACAAAAG CAGCCCAAAC CGACCCCAAA GCACCCCCCA CCTGGCGCCT CACCGACTGC
ACTCTCGTAG TAACCCTCGA ACCCTGCCCC ATGTGCGCCG GCGCCATCGT CCTCTCCCGC
CTCACCCGCG TAGTCTTCGG CGCCTGGGAC CCCAAAGCCG GCGCAGCAGG CTCCCTCTAC
GACATCCTCC GAGACCCCCG CCTCAACCAC ACCCCCGAAG TCATCCCCGG AGTCCTCGAA
CCGCAGTGCC ACGCAGCCCT CAACCGCTTC TTCGAACACC ACCGCCAAAA GTGA
 
Protein sequence
MRLALAEATA AESTGDVPIG AVILDPTGTV IAQGRNTREA EGDPTGHAEI VAIRSAAHTL 
HTKAAQTDPK APPTWRLTDC TLVVTLEPCP MCAGAIVLSR LTRVVFGAWD PKAGAAGSLY
DILRDPRLNH TPEVIPGVLE PQCHAALNRF FEHHRQK