Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8558 |
Symbol | |
ID | 8339938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9928641 |
End bp | 9930272 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644961642 |
Product | replication initiator protein |
Protein accession | YP_003119219 |
Protein GI | 256397655 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0404857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00106122 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACTTCGC AACAGCTCAA GCCAGTAGCG CCGTCCGGGA TCACGGGAAG CCGTGCCGAA CGTGCCCGGA TGCCGCTGGC TCGCAAGGTC CTGGAAGAGT CGGCGATCAA GCATGGCGTC TGCATCCGGC CAGTCCCGCT GCGACGCGTC GACCTCGCGA CCGGCGAAGA ACAGATCATA GACATCCCAT GCGGCGCGAC CCTTTCGAGC GTCTGCCCGC CGTGTGCGGA GGCCAAGCGG CAGCTTCGGA TCGATCAGTG CCGTACCGGC TGGCACCTGG AGCAGGAGCC TGACTTCACT CCCGATCCGG CGACCGACGA ACAGCACCTC CTCGTTCAGC TCCGCTCGCA AGCTCAGAAG TCCCTCGACG ACTCGGACGA CTCCGAGGTG GCCGAGTGGG AAGAGACCGT CTCCGAGATC AACACAGAAC TGGCGGCGAC CGGCGTCCGC GGCCGACTGG GCGTCGAGAA GGCAGCCCGG CGTGTCCGAT CCACGCGGCG CCGTCAGGAC GCGTCGGAGC TCCCGAGGCG TCCCGTAAGT ACGCGGACAG TCGGCAAGGT CTACGAATCG GCCAGCGGAA AGAAGTTCCG TCCGTCGATG TTCCTGACCC TCACGCTCGA CAGCTACGGC AGGGTCACCA AGGACGGGAC ACCGGTCCAG CCGGCCGCCT ACGACTACCA GCGGGCTGCC CGCGACGCGA TCCACTTCGC GAAGCTCGTC GACCGCTTCG TTCAAAACCT CCGTCGCTTC GTCGGCTTCG ATGTACAGTA CTTCGCGGCC GTCGAGCCAC AGCGCCGGTT AGCGCCCCAC CTGCACATGG CGATCCGCGG CACCATCTCC CGAGCCGAGC TCCGCGAGGT CATCGCCGCG ACCTATCACC AAGTGTGGTG GCCGCCGACC GATGAGCCGG TGTACGTCGA CCAGCTGCCG GAGTGGCATG ACGGCACTGG CGCCTACGTC GACGCGACGA CCGGCGAGAT CCTGCCCACC TGGGATCAGG CTCTCGACGA GATCGGCCCG GACGACGAAC CGTCGCACGT AGCTCGCTTC GGGAGGCAGT TCGACGCGCA AGGCGTCCTA GCCGGTACGA AGGATGCGAA CCGCACGATC GGCTACCTGG CCAAATACGT GACCAAGAGT GTCGACGAGT GCCACGAAGC GGCCACCGAC GATCAGCGGG ACCACGTCTC ACGCCTCGTC GAAGCACTTC GTTACGAACC ATGCTCACCG ACCTGCGCGA ACTGGCTCCG CTACGGCGTT CAGCCGAAGA ACCCTCGTCC TGGTCTCCAC CCGGGCGCCT GTCGCGGCAA GGCACACAAG CCGACTCACC TCGGCTACGG CGGACGTCGC GTCCTGGTCT CCCGCAAGTG GTCCGGAAAG ACACTCACCG ACCACAAGAC GGATCGTAAG AACTGGGTGA CCGAAATCCT GGGCGTCGAG CCTCAGATGC CGACGCCAGG TCGCTTCTCG TTCGAGTACG TCTCGCGCGA CGACGCCAAG CTCAAGCCGC TGACGGTCCG CCTCATGCAC CGCATCGCAG ACCGCGTCAC CTGGCGAGCC CAGCTCGACG CAGCGCGCAA CGGTCCACGA TCTCCGGCAG ATCTTTCGGC AACAGCAGGG AGGTCGTCGT GA
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Protein sequence | MTSQQLKPVA PSGITGSRAE RARMPLARKV LEESAIKHGV CIRPVPLRRV DLATGEEQII DIPCGATLSS VCPPCAEAKR QLRIDQCRTG WHLEQEPDFT PDPATDEQHL LVQLRSQAQK SLDDSDDSEV AEWEETVSEI NTELAATGVR GRLGVEKAAR RVRSTRRRQD ASELPRRPVS TRTVGKVYES ASGKKFRPSM FLTLTLDSYG RVTKDGTPVQ PAAYDYQRAA RDAIHFAKLV DRFVQNLRRF VGFDVQYFAA VEPQRRLAPH LHMAIRGTIS RAELREVIAA TYHQVWWPPT DEPVYVDQLP EWHDGTGAYV DATTGEILPT WDQALDEIGP DDEPSHVARF GRQFDAQGVL AGTKDANRTI GYLAKYVTKS VDECHEAATD DQRDHVSRLV EALRYEPCSP TCANWLRYGV QPKNPRPGLH PGACRGKAHK PTHLGYGGRR VLVSRKWSGK TLTDHKTDRK NWVTEILGVE PQMPTPGRFS FEYVSRDDAK LKPLTVRLMH RIADRVTWRA QLDAARNGPR SPADLSATAG RSS
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