| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8555 |
|---|
| Symbol | |
|---|
| ID | 8339935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 9926339 |
|---|
| End bp | 9926758 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644961639 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003119216 |
|---|
| Protein GI | 256397652 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.149601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.000517755 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCC AGGGTGCGAT CCGGGTTCAG TTCGGCGATG TCTTCCCGCA CGGTGCGTTC
GCCGTGGCGG TGGAGGCGGT GCGGGACTTC GACAAGTCCA CACGGGAGCA TCCCGTGCAG
GCGCGGGACA AGGAGTCCGG CGTGCTGGTC TGGGCAGTCG AGGTGCTAGA CGCGGACCCG
GAGGCTCGGG CGGCGGACCG GTCGGTGAAG GTGAAGATCG CGGCGGATCA TCAGCCCGAG
CTGCCCGACC TGATGGCGGG GACGCCGTTT CGGCCGGTCG AGTTCGAAGG GCTGCGGGTG
CGTCCGTACG TCAACAGTCA GGGGCGGTTG GCGTACTCGT ACAACGCCTC GGCGGTGCGG
GGACCGAACG CGGGCGGGAA GCCGGCGGCG GCTGTGAACG GGTCCAAGAG CGCGGGCTGA
|
|---|
| Protein sequence | MAIQGAIRVQ FGDVFPHGAF AVAVEAVRDF DKSTREHPVQ ARDKESGVLV WAVEVLDADP
EARAADRSVK VKIAADHQPE LPDLMAGTPF RPVEFEGLRV RPYVNSQGRL AYSYNASAVR
GPNAGGKPAA AVNGSKSAG
|
|---|
| |