Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8549 |
Symbol | |
ID | 8339929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9922317 |
End bp | 9923549 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644961633 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003119210 |
Protein GI | 256397646 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0123157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000343252 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAGGAA TGACAGAGAC CCTGAGCATC GGTGAACGCG TCGCCTGGTA CCGGCGACGC CGTGGCATGT CGCAAGAGGT GTTGGCCGGC CTGGTCGGTC GGACGGCCGA TTGGCTGGGC AAGGTGGAGA ACGGCCGGAT CTATCTCGAC CGGCTGTCCG TCATTAAGTC GCTGGCCGAT GCGCTGGACG TCCAGCTCGG TGACCTGCTG GCGGAGCCCG CCTTGCTCGA CTGGGCCCAG GACGTGAAGG GCCGCACCGT GTCCGCGCTG CGTGAAGCGC TCATGGACTA TCGGCAACTG ACCCCGTTGC TGAGCGGCGA TGCGAACGGC TTCCGTCCAG ATCTCGAAGT GCTCAAGCAG GAGGTCGGCG AAGCCTGGAC TGCCTTTCAG GACGGCCGTT TCGCTCGCGC CGCTCACGTT GTGCCCTCGG TTCTATCGCT CGCGCAGGCC GCTACGCGTT CGTACAGCGG AGACGAGCAG CTACAGGCGT ACGTGTTGCT CGCGATGGCG TATCAGAGTG CTGCGCAAGT GCTCACCAAG ATCGGTGAGA CGGAACTGGC ATGGATCGCC GCCGACCGTG GGCTGACTGC CGCGCAAGTC TCGGGAGACC CGATCGTCAT CGGTTCGCTG TTTCGGTCCG TCACTCACTG CCTGCTGTCG AACGGCCGCT TCGACGCAGC GAAGCAACTC ACCGCGGACG CGGCTGGCTA CCTTCAGCCG CACGTGGCGA AGGCCTCGCC CGAGTTCCTG TCGATCTACG GGACGCTGTT CCTGGCCGGC TCGGTCGCTG CGGCTCGATC CGACGACCGT GCGACGACGC GGACGTTCCT CGCCGAGGCC GAAGAGTCAG CCCGCCGGCT TGGCGAGGAC GCCAATCACA TGTGGACCGC CTTCGGGCCG ACCAACGTTG CGATTCACCG CGTCGCCACA GCGATGGAGC TCGGCGACGT TCAACTTGCG CTCGACCAAG GGCCGCAGCT CGACACGTCG CAGATGCCGA CCGAGCGCCG CGTCCGGCAT GCGTTGGAAG TCGCTCGCGC CTACGCAGCG CGCAACCACA CCGACGAGGC ACTCTCGCTC ATCCTGGACG CCGAGAAACT GGCGCCCGAG CAGGTTCGCT ATCACTACAT CTCGCGCCAA CTGGTCACTT CGTGGGTCCG GCGCCAGCAC GGCAAGCCCA GCCTCGCACT GTCCGATCTC GCCCAGCGCA TTCACGTGAT CGAGTCCCGT TGA
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Protein sequence | MRGMTETLSI GERVAWYRRR RGMSQEVLAG LVGRTADWLG KVENGRIYLD RLSVIKSLAD ALDVQLGDLL AEPALLDWAQ DVKGRTVSAL REALMDYRQL TPLLSGDANG FRPDLEVLKQ EVGEAWTAFQ DGRFARAAHV VPSVLSLAQA ATRSYSGDEQ LQAYVLLAMA YQSAAQVLTK IGETELAWIA ADRGLTAAQV SGDPIVIGSL FRSVTHCLLS NGRFDAAKQL TADAAGYLQP HVAKASPEFL SIYGTLFLAG SVAAARSDDR ATTRTFLAEA EESARRLGED ANHMWTAFGP TNVAIHRVAT AMELGDVQLA LDQGPQLDTS QMPTERRVRH ALEVARAYAA RNHTDEALSL ILDAEKLAPE QVRYHYISRQ LVTSWVRRQH GKPSLALSDL AQRIHVIESR
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