Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8538 |
Symbol | |
ID | 8339918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9909917 |
End bp | 9910882 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644961624 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003119201 |
Protein GI | 256397637 |
COG category | [K] Transcription |
COG ID | [COG1476] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000674281 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0000867328 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTGGATC CGAGCAGCCA GCAAGATCAA GATGCGGCCA CGGCGCGAGC TGTGGCTCGC GCCGTGGCCG AACTGCGCCG AGCCGAAGGG CTAACCCTCG ATGACTTGGC TGATCGAGCA GGCCTTCATC GGACATCCAT TGGGCTCATC GAACGCGGCG AACGGCTTTT GTCATTGACC TCGGCGGCTA TGATTGCAAG CGCGTTCGGG ATGCGGCTCT CGGACTTGAT TGCGTATGCA GAACGCGAGG AGACGCTGAC CAATCCCACG GGAGATAGGC AGACACCCTC GGGCGCAGTC GTCATTCATC AGCGGACGCC GAAACGGATG GTTAGCCTGT CGCACGCCAG CAATGATGCG GTATTCAGGA AACTGACCGG GATGGGCGTC GATGCAGTCC TGTCCGCTGT CGAATCTACA TATGAAACTA TGGATCTGAT AGACGATGAG CTGATTGCGA AAGATTCACC TCCGATGTCT CGACTGGTCG AACTCGCAAA CCTGTCGTCG ATGATTGGAA ACTTGCTGGG GGCGGGATTG GCCAGCGCGT CTGCCGGAGC ATACATGCGT AACCGCCCTC ACGCCTTTCC TGATCTTGTC CCACTGCGTG ATGGGCTTCC AGATCTTGAG CTAAAGACCG CGCTCGAGGC GAATCGCCCT AAAGGTCATC TACCAAAAGC TGGCACATAC ATTACGTTTC GCTACGTCCT TGCGGATCGT GACGGCAGGT ATCGGCGCGG AAAGGAATCA AGGGGTGATA CGGCATGGAT TTGGGAGGTT CGAGCCGGAT CGCTGGGCGA GGAAGATTTC GCCGTCAGCA GTACCGCAGG CGACAGCGGC AAGACTGCTC AGATAAGAAA CGATTCGCTT CTCGGGATGA TGCGAATCTA TTATGTTCCC GAGCTTCTGC CATATGCGTC GCGAATCGGA CCCTACGGCG AGGTCCCCAA GGATTCGCTC TGGTAA
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Protein sequence | MVDPSSQQDQ DAATARAVAR AVAELRRAEG LTLDDLADRA GLHRTSIGLI ERGERLLSLT SAAMIASAFG MRLSDLIAYA EREETLTNPT GDRQTPSGAV VIHQRTPKRM VSLSHASNDA VFRKLTGMGV DAVLSAVEST YETMDLIDDE LIAKDSPPMS RLVELANLSS MIGNLLGAGL ASASAGAYMR NRPHAFPDLV PLRDGLPDLE LKTALEANRP KGHLPKAGTY ITFRYVLADR DGRYRRGKES RGDTAWIWEV RAGSLGEEDF AVSSTAGDSG KTAQIRNDSL LGMMRIYYVP ELLPYASRIG PYGEVPKDSL W
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