Gene Caci_8538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8538 
Symbol 
ID8339918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9909917 
End bp9910882 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content57% 
IMG OID644961624 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003119201 
Protein GI256397637 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000674281 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000867328 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGGATC CGAGCAGCCA GCAAGATCAA GATGCGGCCA CGGCGCGAGC TGTGGCTCGC 
GCCGTGGCCG AACTGCGCCG AGCCGAAGGG CTAACCCTCG ATGACTTGGC TGATCGAGCA
GGCCTTCATC GGACATCCAT TGGGCTCATC GAACGCGGCG AACGGCTTTT GTCATTGACC
TCGGCGGCTA TGATTGCAAG CGCGTTCGGG ATGCGGCTCT CGGACTTGAT TGCGTATGCA
GAACGCGAGG AGACGCTGAC CAATCCCACG GGAGATAGGC AGACACCCTC GGGCGCAGTC
GTCATTCATC AGCGGACGCC GAAACGGATG GTTAGCCTGT CGCACGCCAG CAATGATGCG
GTATTCAGGA AACTGACCGG GATGGGCGTC GATGCAGTCC TGTCCGCTGT CGAATCTACA
TATGAAACTA TGGATCTGAT AGACGATGAG CTGATTGCGA AAGATTCACC TCCGATGTCT
CGACTGGTCG AACTCGCAAA CCTGTCGTCG ATGATTGGAA ACTTGCTGGG GGCGGGATTG
GCCAGCGCGT CTGCCGGAGC ATACATGCGT AACCGCCCTC ACGCCTTTCC TGATCTTGTC
CCACTGCGTG ATGGGCTTCC AGATCTTGAG CTAAAGACCG CGCTCGAGGC GAATCGCCCT
AAAGGTCATC TACCAAAAGC TGGCACATAC ATTACGTTTC GCTACGTCCT TGCGGATCGT
GACGGCAGGT ATCGGCGCGG AAAGGAATCA AGGGGTGATA CGGCATGGAT TTGGGAGGTT
CGAGCCGGAT CGCTGGGCGA GGAAGATTTC GCCGTCAGCA GTACCGCAGG CGACAGCGGC
AAGACTGCTC AGATAAGAAA CGATTCGCTT CTCGGGATGA TGCGAATCTA TTATGTTCCC
GAGCTTCTGC CATATGCGTC GCGAATCGGA CCCTACGGCG AGGTCCCCAA GGATTCGCTC
TGGTAA
 
Protein sequence
MVDPSSQQDQ DAATARAVAR AVAELRRAEG LTLDDLADRA GLHRTSIGLI ERGERLLSLT 
SAAMIASAFG MRLSDLIAYA EREETLTNPT GDRQTPSGAV VIHQRTPKRM VSLSHASNDA
VFRKLTGMGV DAVLSAVEST YETMDLIDDE LIAKDSPPMS RLVELANLSS MIGNLLGAGL
ASASAGAYMR NRPHAFPDLV PLRDGLPDLE LKTALEANRP KGHLPKAGTY ITFRYVLADR
DGRYRRGKES RGDTAWIWEV RAGSLGEEDF AVSSTAGDSG KTAQIRNDSL LGMMRIYYVP
ELLPYASRIG PYGEVPKDSL W