Gene Caci_8519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8519 
Symbol 
ID8339899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9882172 
End bp9884334 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content72% 
IMG OID644961606 
Productserine/threonine protein kinase 
Protein accessionYP_003119183 
Protein GI256397619 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.378957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0297382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGGGG AAGAAGCCCA GAGCAATCCG CTGCCACCGG GATTCGACGA CGTCGAGCCC 
TTGGCGCTCA CCAGCTGCGG CCAGGTGTAC CGCGCGCGCG CCGCGACCGT CGAAGGGCAC
GTCGAACAGG TCGCGGTCAC CCTGGTGGAC ACCCCGGTCC GCGGCCGCGA CGCACGGCGT
CTGCGCAGCG ACTGCCTCGG CGCCGTCGCC ATCAACGCCG AACCCGGCGT CCTGGCCGTC
CGCGACCTGG GCTTCACCAA GGACCACCGC CCCTTCCTGG TGACGGACAC GATCCTGCCG
GGCACCCTCG CCACCCGCAT CGAGCAGCAA GGCGCCCTCC CACCCGGCGA AGTCATAGTC
CTCGGCCTGA CGTTGGCACG CGCGCTCCAA GCCGCCCACA CCAACGGAAT CCTGCACCTG
GGCGTCGCCC CCGACGTCGT GTTCCCCACC CCCGAAGGCC CGACCCTGGG CCACTTCGGC
CTCGCCTGGG CAGTCCGCCC ACCCTCCCAA CCCGACGTCC CCGCCACCGC CATCATGCAC
GCCCCCCGCG AACTCTTCGG CTGGGCAGGC CCCACCACCG GCTCCGACGT CTACGGCCTC
GCCTCAGTCC TCCGCACAGC CCTCACCGGC CGCGCCCCCT TCGAAACCGA AGCCCGCACC
AGCCGCGCAG CCCTCTACCA CCGCCTGGTC CAAGGCGCCC CACCCAAACT CCACCACCCC
GGCGTCCCCG ACCAACTGAC CACCCTCCTA GACCGCATGC TCGACCCCGA AGCCTCCCGC
CGCCCCCCAC TCGACGAAGT CACCCACACG CTCCACGCAG TAGCGCAGAT CCCAGGCCTG
ATGACGGCGC GATCCGCGCC GATGCCAGCA CCGCAACCGG CGATGCAGAC GCCGACGGTG
GTGCTCCAGA CGCCGCAGCC GCAGCCGGTC ATCGGGCAGC AGATGCAGCA GATGCCGCCG
CAGCCTGTGA TCGCACAGCA GGTTCAGGCG AGCGCACCAC AGCCAGCTCC TCAAGCGCCG
CCGCAGCCCC AAGTCGCCGC GCCGCACGCT CCGGCTCCCC AAAATCCGCA GGCACCCGCG
CCGCAGCCAC CGATTGCGCC GCAAGGCCTG CCCACGCCAG AACACCAAAT CGCTGCCCTG
ACACCCACAC CTGCGCCGAC ACCACCAGCA CCCGCGTCGC AAGGTCTGCC CATACCAGAG
CACCACATCG CTGCCCGGGC ATCCGCACCT ACGTCGACAC CGCCAGCACC AGCACCCGCG
CCGCAGCCAC CGATCGCGCC GCAAGGCCTG CCCGTCCCGG CGAGCTTCCC CGCACCGCAG
CCTGCTCCTC AAGCGCCGCC GGAGCGGCAA GTTGCCGCGC TGGCTTCCGC ACCCGCGCAG
ACACCGCCCG CCGCAGCGCC CCAAGCGCCG GCTCCCCAAA GCCTCGCAGT GTCCTCGCCG
CAGCCGATCG CCGCGCCCCA AAGCCAGCCG TTCCCCTCGC CGCAGCCGGT CTCCGCATCC
CCATCCCCAT CCCCATCCTC GGCGCCGCAC CTCCCCGGCA ACTTCCTCGA CCTGCCGCCC
TTCTCCCAGC AGTCGCAGGC CACCGGCTTC CCGGCGCCGC GTCCCATGCC TCCGGCGATC
GCCGCGACCA CTCCCGCGCC GAAGGTCGTT GAGCCGCGGC GGCGTAACAC CGGCCTCGTG
CTGCTCGTTG CTGCGGGGCT GACGGCGCTT GCTGCGGGGG TGGCGTGGGG GGTGGCTACC
GCTCCGAAGA AGTCCACGTC GTCGGCGGGG ACCAGTCCGG TCGTCAGTGT TCCGACCTTC
AGTGGGGCGC AGCGGTCCGC CTATGAGGTG ACCGATGCGA AGGCCAGTGC GGCTGGGGGC
GATGGGGTCG CCGTGACGTG GTCTCCGCCG CGGCAGACGG CTGGTGTGCA GAGCTACATC
GTTGTGGTGA ACCTGCACAA TCAGTCCGTG CAGAGCACGA CTGTTGCCGG GCAGACGCTC
ACCGCCACGT TCAAGGGCTT GACGCCGGGG ACCACCTACT GCGTCAGCGT CGTGACGTTC
GCCGTCGCGC CCGGGGACTC CGGTCCGCAC ACCGCGCCGC CGGATCAGTG CGCGCTCGTC
ACCACGCCGA GCACGACGAA CCCGGCGTCG CCCGGCGGGC CGACGACCAC CCGCGCCGCC
TGA
 
Protein sequence
MNGEEAQSNP LPPGFDDVEP LALTSCGQVY RARAATVEGH VEQVAVTLVD TPVRGRDARR 
LRSDCLGAVA INAEPGVLAV RDLGFTKDHR PFLVTDTILP GTLATRIEQQ GALPPGEVIV
LGLTLARALQ AAHTNGILHL GVAPDVVFPT PEGPTLGHFG LAWAVRPPSQ PDVPATAIMH
APRELFGWAG PTTGSDVYGL ASVLRTALTG RAPFETEART SRAALYHRLV QGAPPKLHHP
GVPDQLTTLL DRMLDPEASR RPPLDEVTHT LHAVAQIPGL MTARSAPMPA PQPAMQTPTV
VLQTPQPQPV IGQQMQQMPP QPVIAQQVQA SAPQPAPQAP PQPQVAAPHA PAPQNPQAPA
PQPPIAPQGL PTPEHQIAAL TPTPAPTPPA PASQGLPIPE HHIAARASAP TSTPPAPAPA
PQPPIAPQGL PVPASFPAPQ PAPQAPPERQ VAALASAPAQ TPPAAAPQAP APQSLAVSSP
QPIAAPQSQP FPSPQPVSAS PSPSPSSAPH LPGNFLDLPP FSQQSQATGF PAPRPMPPAI
AATTPAPKVV EPRRRNTGLV LLVAAGLTAL AAGVAWGVAT APKKSTSSAG TSPVVSVPTF
SGAQRSAYEV TDAKASAAGG DGVAVTWSPP RQTAGVQSYI VVVNLHNQSV QSTTVAGQTL
TATFKGLTPG TTYCVSVVTF AVAPGDSGPH TAPPDQCALV TTPSTTNPAS PGGPTTTRAA