Gene Caci_8513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8513 
Symbol 
ID8339893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9872265 
End bp9873200 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content71% 
IMG OID644961600 
ProductSilent information regulator protein Sir2 
Protein accessionYP_003119177 
Protein GI256397613 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00986574 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGCTCA GGGGTAATGG AGCTTACGCT GGAGTGGTGC GTACGCGACC GACGTTGACC 
TGGGAACCAC CGAGCGGCGA GGTTTTCGCG CGCACGACGA GCCTGGACGC CATGGTCGAC
CTGGTGGCGG GGCGCGGAGT CGTCGTGCTG AGCGGGGCTG GGCTGTCCAC GGAGTCCGGG
ATTCCCGACT ACCGCGGGAA ATCCGGCGCG CTGCGCAGAC ACACGCCGAT GACCTACGAG
GACTTCGCGG GCAGTGCGCA GGCCCGGCAG CGGTATTGGG CACGAAGCCA CCTCGGGTGG
CGCGCGATGG CCGGGGCGCA GCCGAACGTC GGGCATCGGG CGGTCGCCGC GCTGCGCGCC
TCGGGGCACG TGGACGGCGT GATCACGCAG AACGTGGACG GGCTGCACCA GGCGGCGGGG
ACGCTGCCGG AGGTCGTCGA CCTGCACGGG AGCCTGGATC GGGTCATCTG CCTGACCTGC
GGCGTGTTCA GCGAGCGGAC GGAACTGGAG CGCCGGCTGA ACGAGGCGAA CCCGGTGTTC
GACGGTGTCG CGGCGCGCAT CAACCCCGAT GGGGACGTGG AGCTCGCCGA GGACGCGGTG
CGGCGTTTCC GCTCGGTGGA CTGTGACTCC TGTGGCGAGG GGGTACTGAA GCCGGATGTC
GTGTTCTTCG GCGAGAACGT GCCCAAGGCG CGGGTCGAGC GGTGCAAAGA GTTGGTGGAC
GGCGCCGCGG CGCTGCTCGT GCTCGGGTCG TCGCTGACGG TGATGTCGGG GCTGCGGTTC
GTGCGGCGGG CGGCCGAGGC GGGGAAGCCG GTCGTGATCG TCAACCAGGG CCTCACACGG
GGCGATCGCT ATGCCTCGGA ACGGATCGAG GCGCCGTTGG GAGCGGCACT GGTGGAACTC
GTGGGGCGCG TGGGGGCGGC GGCGGATCTC GGCTAG
 
Protein sequence
MELRGNGAYA GVVRTRPTLT WEPPSGEVFA RTTSLDAMVD LVAGRGVVVL SGAGLSTESG 
IPDYRGKSGA LRRHTPMTYE DFAGSAQARQ RYWARSHLGW RAMAGAQPNV GHRAVAALRA
SGHVDGVITQ NVDGLHQAAG TLPEVVDLHG SLDRVICLTC GVFSERTELE RRLNEANPVF
DGVAARINPD GDVELAEDAV RRFRSVDCDS CGEGVLKPDV VFFGENVPKA RVERCKELVD
GAAALLVLGS SLTVMSGLRF VRRAAEAGKP VVIVNQGLTR GDRYASERIE APLGAALVEL
VGRVGAAADL G