Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8513 |
Symbol | |
ID | 8339893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9872265 |
End bp | 9873200 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644961600 |
Product | Silent information regulator protein Sir2 |
Protein accession | YP_003119177 |
Protein GI | 256397613 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00986574 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGCTCA GGGGTAATGG AGCTTACGCT GGAGTGGTGC GTACGCGACC GACGTTGACC TGGGAACCAC CGAGCGGCGA GGTTTTCGCG CGCACGACGA GCCTGGACGC CATGGTCGAC CTGGTGGCGG GGCGCGGAGT CGTCGTGCTG AGCGGGGCTG GGCTGTCCAC GGAGTCCGGG ATTCCCGACT ACCGCGGGAA ATCCGGCGCG CTGCGCAGAC ACACGCCGAT GACCTACGAG GACTTCGCGG GCAGTGCGCA GGCCCGGCAG CGGTATTGGG CACGAAGCCA CCTCGGGTGG CGCGCGATGG CCGGGGCGCA GCCGAACGTC GGGCATCGGG CGGTCGCCGC GCTGCGCGCC TCGGGGCACG TGGACGGCGT GATCACGCAG AACGTGGACG GGCTGCACCA GGCGGCGGGG ACGCTGCCGG AGGTCGTCGA CCTGCACGGG AGCCTGGATC GGGTCATCTG CCTGACCTGC GGCGTGTTCA GCGAGCGGAC GGAACTGGAG CGCCGGCTGA ACGAGGCGAA CCCGGTGTTC GACGGTGTCG CGGCGCGCAT CAACCCCGAT GGGGACGTGG AGCTCGCCGA GGACGCGGTG CGGCGTTTCC GCTCGGTGGA CTGTGACTCC TGTGGCGAGG GGGTACTGAA GCCGGATGTC GTGTTCTTCG GCGAGAACGT GCCCAAGGCG CGGGTCGAGC GGTGCAAAGA GTTGGTGGAC GGCGCCGCGG CGCTGCTCGT GCTCGGGTCG TCGCTGACGG TGATGTCGGG GCTGCGGTTC GTGCGGCGGG CGGCCGAGGC GGGGAAGCCG GTCGTGATCG TCAACCAGGG CCTCACACGG GGCGATCGCT ATGCCTCGGA ACGGATCGAG GCGCCGTTGG GAGCGGCACT GGTGGAACTC GTGGGGCGCG TGGGGGCGGC GGCGGATCTC GGCTAG
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Protein sequence | MELRGNGAYA GVVRTRPTLT WEPPSGEVFA RTTSLDAMVD LVAGRGVVVL SGAGLSTESG IPDYRGKSGA LRRHTPMTYE DFAGSAQARQ RYWARSHLGW RAMAGAQPNV GHRAVAALRA SGHVDGVITQ NVDGLHQAAG TLPEVVDLHG SLDRVICLTC GVFSERTELE RRLNEANPVF DGVAARINPD GDVELAEDAV RRFRSVDCDS CGEGVLKPDV VFFGENVPKA RVERCKELVD GAAALLVLGS SLTVMSGLRF VRRAAEAGKP VVIVNQGLTR GDRYASERIE APLGAALVEL VGRVGAAADL G
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