| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8509 |
|---|
| Symbol | |
|---|
| ID | 8339889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9868421 |
|---|
| End bp | 9869542 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644961596 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003119173 |
|---|
| Protein GI | 256397609 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0326575 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTCGG CGGGCTGGTT CCCGCCCTAC CTGGAGGAGG TCGCCGAACA GGCGGAGGCG
GGGACGCGCT CGAAGGTGTG GCTCTACGAC CTGCCCTACG ACCTGACGGT TCTGGACCAG
CGCTTCGTGA CCGGCCCGTC GAAGGTACGC AGGCTGATAT ACGGCAGGCT GCCGTTGCCG
CTGGCCTTCG CGGCGGAAGC CTTCCGCGTG CGCAAGAAGT ACGACGCGAT CTTCGCCTGG
GGCGCCGAGG CGGCGAGCCT GCCGCTGGCG TTGGCGTTCC GGTTCACCCC GCGTCGGAAG
CGGGCGCCGC TCGTCACGCT GTACAGCTGG ATCTCCTCCG GCATGAAGGC GAAGCTGCTG
CGCTTCGCGT GGCCGGGTAT CACGACGCTC GTCCTGCCGC CGACGGCGCA GGCGGAGTTC
GCGGTCAAGC AGCTCGGGGT GCCGGCGGAG CGGGTCACGT CGCCGAAGTG GGTCGTGGAC
ACGGAGTTCT TCAACCCGGA CTTGGTGAAG CCCGAAGCGG TGGACGTCAC GGCCGTCGCG
GAGGACGCAG ACGACGCAGA CGGTCCAGAC CACGGCGCCG TGACGATCTG CTCCGCCGGT
CGGGAGATGC GCGACTTCGC GACGCTGATC GCCGCCCTCG ACGGGACCGG GATCCGTTGC
CACATCGCGG GTTCGCTGGT GGCGGGGATG GATGACCGCT GGCGTGCCGA GCTCGGCGAT
CGCGGCGAGC GGGTCGCGCT GCCGGAGGGC GTCACCTTCG GGCCGCTGAC GCCGATCGAG
ATGCGCGAGC TGTACGCGCG CTCGCGGTTC GTGGTGCTTC CGCTGCATCC CAGCGACACG
GATCACGGCA TCAGCTGCAT GATCGAGGCT TTCGCGATGG GTCGTGCGGT GGTCTGTACC
CGCGTCGACG GGCAGCGGGA TGCGCTGGAG GAGGGCGTGA ACGGTGCCTT CGTGCCGGCG
CATGACGCGG CGGCGTTGCG TGCGCAGATT CTGGAGCTGA TCGCCGATCC GGAGCGGGCT
GAGGCGATGG GGCGTGAGGC ACGTCGGCTG GCTGAGGCGG AGTTCGGGAT GGACCGGTGG
GTCTCGGCGC TGACGGAGGT GCTTGATGCA GTCGTCAGCT GA
|
|---|
| Protein sequence | MVSAGWFPPY LEEVAEQAEA GTRSKVWLYD LPYDLTVLDQ RFVTGPSKVR RLIYGRLPLP
LAFAAEAFRV RKKYDAIFAW GAEAASLPLA LAFRFTPRRK RAPLVTLYSW ISSGMKAKLL
RFAWPGITTL VLPPTAQAEF AVKQLGVPAE RVTSPKWVVD TEFFNPDLVK PEAVDVTAVA
EDADDADGPD HGAVTICSAG REMRDFATLI AALDGTGIRC HIAGSLVAGM DDRWRAELGD
RGERVALPEG VTFGPLTPIE MRELYARSRF VVLPLHPSDT DHGISCMIEA FAMGRAVVCT
RVDGQRDALE EGVNGAFVPA HDAAALRAQI LELIADPERA EAMGREARRL AEAEFGMDRW
VSALTEVLDA VVS
|
|---|
| |