| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8448 |
|---|
| Symbol | hppA |
|---|
| ID | 8339828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9777916 |
|---|
| End bp | 9780360 |
|---|
| Gene Length | 2445 bp |
|---|
| Protein Length | 814 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644961535 |
|---|
| Product | membrane-bound proton-translocating pyrophosphatase |
|---|
| Protein accession | YP_003119112 |
|---|
| Protein GI | 256397548 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3808] Inorganic pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00153497 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAAT TCGCGGACAG CGGCTCGACG GTGATCCCTT TGGCCGGGGG CAACCTCGCC
TGGATCTTCG TGGTGGCCGT GATCGCCCTA GGTGCGCTTG GCGTCGCCGG CATCCTTGTC
AAAGAGGTGC TGGCGGCCAG CGAGGGCACA GAGAATATGA AACGCATCGC GGCCGCGGTG
CAAGAAGGCG CGTCCGCGTA TCTCGCGCGG CAGTTCCGCA CACTGGCGAT CTTCGCGGCC
GCGGCCTTCT TCCTGCTGCT GGCCCTGCCG GCCGACGACT GGTCGCAGCG CATCGGGCGC
TCGGTCTTCT TCCTGGTCGG AGCCGCCTTC TCGGCCACGA CCGGGTACGT CGGCATGTGG
CTGGCGGTGC GCTCGAACGT CCGCGTGGCC GCGGCGGCGA ACGAGTCCGG CTCGCCGCGG
GCGATGCGGA TCGCCTTCCG CACCGGCGGC GTGGTCGGCA TGTTCACCGT CGGCCTGGGC
CTGTTCGGCG CCGCGCTGGT GGTGCTCATC TACAAGGGCA ACGCCCCGAA CGTGCTCGAG
GGCTTCGGCT TCGGCGCCGC CATGCTGGCC ATGTTCATGC GTGTCGGCGG AGGCATCTTC
ACCAAGGCCG CGGACGTCGG CGCGGACCTG GTCGGCAAGA TCGAGCAGGG TATCCCCGAG
GACGACCCGC GCAACGCCGC GACCATCGCG GACAACGTCG GCGACAACGT CGGCGACTGC
GCGGGCATGG CCGCGGACTT GTTCGAATCC TACGCGGTCA TGCTGGTCGC CGCACTGATT
CTGGGAAAGA TCGCTTTCGG TACCCAGGGC TTGGTGTTCC CGCTCATGGT GCCGGCGCTC
GGCGTGATCA CCGCGGTCCT CGGCATCTTC ACTGTGTCCC CGCGCACGGG GGACAAGAAC
GCGATGGCGG CGATCAACCG CGGCTTCTTC ATCAGCGCCG TGGTAGCGGT GGTCCTGGTG
GCGATCGCGG CGTTCACCTA TCTGCCCGAC AAGATCTCCA AGCTGGACCA TGTCGACCCC
GGCGTGCTGG CCGACGCCGC GACGAAGGAT CCGCGCCTGA TCGCCTTGGG CGCCGTGGTG
ATCGGCATCG TGGTGGCCGC GGTCATCCAG GTGCTGACCG GGTACTTCAC CGAGACCACC
CGGCGTCCGG TGCAGGACAT CGGCAAGACC TCGCTGACCG GGCCGGCGAC AGTGGTCCTG
GCCGGCATCG GCATCGGGCT GGAGTCCGCG GTCTACTCGG CGCTGCTGAT CGGCGGCGGC
GTGTTCCTGG CGTACCTGCT CGGCGGCGCC TCGCTGACCC TGTCGCTGTT CGCGGTGGCC
ATGGCCGGCA CGGGTCTGCT GACCACGGTC GGCGTCATCG TCGCGATGGA CACCTTCGGC
CCGGTCTCGG ACAACGCGCA GGGCATCGCG GAGATGTCCG GCGACGTCGG GGAGGAGGGC
GCGAAGGTGC TGACCTCGCT GGACGCGGTC GGCAACACCA CCAAGGCGAT CACCAAGGGC
ATCGCGATCG CGACCGCCGT GCTGGCCGCG ACCGCGCTGT TCGGGTCGTT CACCCAGAAG
ATCACCGAGG CCGTGGGCAA GGTCCACGAC CCCAAGCTGG GCAGCCCGGA GCAGGCGCTG
CAGTTCGGCG GCGTCCTGAA CATCGGCGAC CCGCGGAACC TGTTCGGTCT GATGATCGGC
GCGGCCGTGG TGTTCCTGTT CTCGGGCCTG GCGATCAACG CCGTGTCCCG GGCCGCGGGC
GCGGTCGTGT ACGAGGTCCG CCGCCAGTTC CGCGAGATCC CCGGCATCAT GGACGGCACC
GGGCGGCCCG AGTACGGCCG CGTGGTGGAC ATCGTCACGA CCGACTCGCT GCGCGAGCTC
ATCACCCCGG GTCTGCTGGC GGTGATGGCG CCGATCGCGG TCGGCTTCAC CCTCGGCGTC
GGCGCGCTGG GCTCCTACCT GGCCGGCGTG ATCGGCACCG GCGTCCTGAT GGCGGTCTTC
CTGTCGAACT CCGGCGGCGC CTGGGACAAC GCCAAGAAGC TGGTCGAGGA CGGCAACTTC
GGCGGCAAGG GCTCCGAGGC GCACACCGCG ACCATCGTCG GGGACACCAT CGGCGACCCG
TTCAAGGACA CCGCCGGTCC CGCGATCAAC CCGCTGATCA AGGTGATGAA CCTGGTCAGC
CTCCTGATCG CGCCCGCCGT GGTCCAGCTG TCGATCGGCA CCTCGGCCAA CGCCGCGGTC
CGCGCCCTGA TCGCCATCGC CGCGATCCTG GTGATCGTCG CCGCGGTCTG GAACAGCAAG
CGCAAGTCGA TCGCCGTCTC GGACTCCCAC GGCGACTCTG GCGCCGGCTC CACGCCGGTC
ACCGGCGTCG GCGCGGCCGT CGAGGCAGCG GCCCCGGCCG CCCCCGGCGC ACCGCGCAAC
GGCGACGAGG ACACCTCGAT GGAGGCTTCC GCGCAGTCGA TCTGA
|
|---|
| Protein sequence | MPQFADSGST VIPLAGGNLA WIFVVAVIAL GALGVAGILV KEVLAASEGT ENMKRIAAAV
QEGASAYLAR QFRTLAIFAA AAFFLLLALP ADDWSQRIGR SVFFLVGAAF SATTGYVGMW
LAVRSNVRVA AAANESGSPR AMRIAFRTGG VVGMFTVGLG LFGAALVVLI YKGNAPNVLE
GFGFGAAMLA MFMRVGGGIF TKAADVGADL VGKIEQGIPE DDPRNAATIA DNVGDNVGDC
AGMAADLFES YAVMLVAALI LGKIAFGTQG LVFPLMVPAL GVITAVLGIF TVSPRTGDKN
AMAAINRGFF ISAVVAVVLV AIAAFTYLPD KISKLDHVDP GVLADAATKD PRLIALGAVV
IGIVVAAVIQ VLTGYFTETT RRPVQDIGKT SLTGPATVVL AGIGIGLESA VYSALLIGGG
VFLAYLLGGA SLTLSLFAVA MAGTGLLTTV GVIVAMDTFG PVSDNAQGIA EMSGDVGEEG
AKVLTSLDAV GNTTKAITKG IAIATAVLAA TALFGSFTQK ITEAVGKVHD PKLGSPEQAL
QFGGVLNIGD PRNLFGLMIG AAVVFLFSGL AINAVSRAAG AVVYEVRRQF REIPGIMDGT
GRPEYGRVVD IVTTDSLREL ITPGLLAVMA PIAVGFTLGV GALGSYLAGV IGTGVLMAVF
LSNSGGAWDN AKKLVEDGNF GGKGSEAHTA TIVGDTIGDP FKDTAGPAIN PLIKVMNLVS
LLIAPAVVQL SIGTSANAAV RALIAIAAIL VIVAAVWNSK RKSIAVSDSH GDSGAGSTPV
TGVGAAVEAA APAAPGAPRN GDEDTSMEAS AQSI
|
|---|
| |