Gene Caci_8443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8443 
Symbol 
ID8339823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9771526 
End bp9771954 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content65% 
IMG OID644961530 
Productprotein of unknown function DUF820 
Protein accessionYP_003119107 
Protein GI256397543 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0498606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTCC TCCGCACGGT GCTGCGGTCG AGCGCGCCGG AGGGCTGGCG TGTCACCCAT 
GAGATGACCG TGTGGCTGGA CGACCGGAAC CGGCCCGAGC CCGACGTCCT CGTGGTCGCC
GCCTCGGCGA TGCGCCCTGA CATGAGCGAG ACCTTCTATC GCCCCGAGGA CATCGCGCTG
GCCATCGAGA TCGTCTCGCC GGAGTCCGTC GAGCGCGATC ATGAGGTCAA GTCGCCGAAG
TACGCGCGAG CCGGGATCAA GAACTTGTGG CTCGTCGAGC GGGACGGCGA GGGGATGATC
GCCTATGTGT ACGTCCTTGA CCCGCTCACG GGCGACTACA GTCTGGTCGG CACTTTCGGC
GAGCGGCTGA AGGTCTCGGT GCCGTTCGAC ATCGACATCG ACTTCACCAG GCTCGACGAA
TACGACTGA
 
Protein sequence
MFFLRTVLRS SAPEGWRVTH EMTVWLDDRN RPEPDVLVVA ASAMRPDMSE TFYRPEDIAL 
AIEIVSPESV ERDHEVKSPK YARAGIKNLW LVERDGEGMI AYVYVLDPLT GDYSLVGTFG
ERLKVSVPFD IDIDFTRLDE YD