Gene Caci_8438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8438 
Symbol 
ID8339818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9767146 
End bp9767619 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content70% 
IMG OID644961525 
ProductNUDIX hydrolase 
Protein accessionYP_003119102 
Protein GI256397538 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.370098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATTC CCGAGTTCAT CGTCGCGATC CGCACGAAGA TCGGCCACGA CCTCCTGTGG 
CTCCCCGGGG TCACCGGCCT CGTGGTCGAC GACGAGCAGC GGGTGCTCCT GGTCCGGCGC
GCCGACACCC TCGAGTGGAC CCTCGTCTCG GGCTGCCTGG ACCCGGGCGA GCAGCCCGCG
GCGGGCATCG TGCGCGAGAT CGACGAGGAG ACCGGCGTGA CGGCGCGCGC CGAACGCGTG
CTGGCGGTGG ACGCCACAGG GCAGTTCACG CACCCCAACG GCGACGAGAC GGTGTTCATG
GACGTGGTCT TCGTCTGCAC CCCGACCGGC GGCTCCGCAC GGGTCAACGA CGACGAGTCG
GTCGACGTGG GATGGTTCCC GATCGCGGAC CTGCCCGAGC TGCCGGCGCG GCATCAGGCC
TATGTGAAGC GCTATCTCGA CGGCGGGGAA GCTGCGTGGT TCGCGCAGGC GTGA
 
Protein sequence
MPIPEFIVAI RTKIGHDLLW LPGVTGLVVD DEQRVLLVRR ADTLEWTLVS GCLDPGEQPA 
AGIVREIDEE TGVTARAERV LAVDATGQFT HPNGDETVFM DVVFVCTPTG GSARVNDDES
VDVGWFPIAD LPELPARHQA YVKRYLDGGE AAWFAQA