Gene Caci_8429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8429 
Symbol 
ID8339809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9758561 
End bp9759616 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content73% 
IMG OID644961516 
Producthypothetical protein 
Protein accessionYP_003119093 
Protein GI256397529 
COG category[S] Function unknown 
COG ID[COG5282] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03624] putative hydrolase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGA GAGCGCAGCT GGTCGACTGG CAACTTGCGG TGACGACGGC GCAGCGCCTG 
GTGCGGCCGG GCCCGGCGAC CTCCGCGGCT GAGGCCGCCG CCACGGTGGC GGACCTGCGC
CGGTACGCCG CCGAGTCGCG CGAGCATGTG GCGGGTTTCA CCGGCCTGGC CAACCAGGGC
ACCATCCTGA CCGAGCCGCA GGTGCTCGTG GTGGACCGGG CCGGCTGGAT CAAGGCCAAC
GCCGAGGGCT TCAAGATCGT CACCGAGCCG CTGGCGCGCA AGCTCAACGA GAAGCGCGAG
GGCGTGCCGC CGTCCGGGCT GGCCGCGCTG GGTCCCAAGG CGACCGCGCT GGAGCTGGGC
ACCCTGCTGG CCTACCTGTC GCACCGGATC CTGGGGCAGT ACGAGATCTT CCAGGAGCCC
GGCCGGCTGC TGCTGGTCGC CCCGAACATC GTCAGCGTGG AGCGGGAGCT GCAGGTCAAG
CCGGACGACT TCCGGCTGTG GGTGTGCCTG CACGAGGAGA CCCACCGCAC GCAGTTCGCC
GCCGTGCCGT GGTTGCGGGC GCACATCCTG GGCGAGATCG AGTCCTTCAT CGCCGGCATG
GACACCGATC CCGGCGCGCT GGCCAAGCGG GTCCGCGAGG CGGCCCAGGC GCGGCGCGAC
GGTGGCGAGC GGCGTCCGCT CACCGAGCTG GTGCAGACCC CGCAGCAGGT GGCGGTGCTG
GACCGGATGG TCGCGGTGAT GTCGCTGCTG GAGGGACACG CGGACTTCGT GATGGACGGC
GTCGGACCGC AGGTGGTGCC CAGCGTCGGG GACATCCGCC GCAAGTTCGG GCAGCGCCGG
GCCAAGGGCG CCAGCCGCAT CGACGCGATC GTGCGCCGGG TGATCGGCAT GGACGCCAAG
ATCCGGCAGT ACCGGGACGG CGCGCGGTTC GTCGGCGCCG TGGTCGAGCA GGCCGGGATG
TCCGGCTTCA ACCGGGTGTG GACCTCGCCG AACACGCTGC CGACCCGGGC CGAGATCCAC
GACCCGGAAG CCTGGCTGGC GCGGGTGCGG CCTTAG
 
Protein sequence
MTARAQLVDW QLAVTTAQRL VRPGPATSAA EAAATVADLR RYAAESREHV AGFTGLANQG 
TILTEPQVLV VDRAGWIKAN AEGFKIVTEP LARKLNEKRE GVPPSGLAAL GPKATALELG
TLLAYLSHRI LGQYEIFQEP GRLLLVAPNI VSVERELQVK PDDFRLWVCL HEETHRTQFA
AVPWLRAHIL GEIESFIAGM DTDPGALAKR VREAAQARRD GGERRPLTEL VQTPQQVAVL
DRMVAVMSLL EGHADFVMDG VGPQVVPSVG DIRRKFGQRR AKGASRIDAI VRRVIGMDAK
IRQYRDGARF VGAVVEQAGM SGFNRVWTSP NTLPTRAEIH DPEAWLARVR P