Gene Caci_8425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8425 
Symbol 
ID8339805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9753807 
End bp9754511 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content72% 
IMG OID644961512 
ProductGTP cyclohydrolase I 
Protein accessionYP_003119089 
Protein GI256397525 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAGA GCACCACCGA GAACCAGCGC GGCGGCGATG CCGCCTCCCG GGCCGCGAGC 
GACCCGGGAG GCGGCATCGC CCGCGTCAGC CTCGCCGGCC AGCCCGGGCA GGCGGCGCCG
GACCTGGGCC GCGCGGTCTC CGGCTACGAC GCCGAGCGTG CCGAGCGCGC GGTCCGCGAA
CTGCTCCTGG CGGTCGGGGA GGACCCGGAC CGCGAGGGTC TGAAGGAGAC CCCGGCGCGG
GTGTCGCGGG CCTACCGCGA GATATTCGCC GGGCTGCACC AGGGCCCTGA GGACGTGCTG
ACCACGACCT TCGACCTGGG CCACGACGAG ATGGTGCTGG TCCGCGACAT CGAGGTGTAC
AGCACCTGCG AACACCACCT CGTGCCGTTC CACGGAGTGG CCCACGTGGG GTACATTCCC
TCGGTGGACG GACGGATCAC GGGCCTGTCG AAGCTGGCCC GGCTGGTCGA CGTCTACGCC
AAGCGGCCGC AGGTCCAGGA GCGCCTGACG ACGCAGATCG CCGACGCGCT GGTCCGCATC
CTGGAGCCGC GCGGGGTCAT CGTCGTTGTG GAGTGCGAAC ACCTGTGCAT GTCGATGCGA
GGGATCAGGA AGCCGGGCGC GAAGACCGTG ACCTCGGCGG TGCGGGGGCA GCTGCTCGCC
CCGGCGAGCC GTGCCGAGGC GATGAGCCTG ATCCTGGGCC GGTGA
 
Protein sequence
MSESTTENQR GGDAASRAAS DPGGGIARVS LAGQPGQAAP DLGRAVSGYD AERAERAVRE 
LLLAVGEDPD REGLKETPAR VSRAYREIFA GLHQGPEDVL TTTFDLGHDE MVLVRDIEVY
STCEHHLVPF HGVAHVGYIP SVDGRITGLS KLARLVDVYA KRPQVQERLT TQIADALVRI
LEPRGVIVVV ECEHLCMSMR GIRKPGAKTV TSAVRGQLLA PASRAEAMSL ILGR