Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8424 |
Symbol | |
ID | 8339804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9751375 |
End bp | 9753480 |
Gene Length | 2106 bp |
Protein Length | 701 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644961511 |
Product | protein of unknown function DUF470 |
Protein accession | YP_003119088 |
Protein GI | 256397524 |
COG category | [S] Function unknown |
COG ID | [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGGG CCAAAGCCAT GACCTCCAAG ACCGAGCCGC CCCCGTCCGA TACGGCGGCG GTCCAGCCGC CGCCGCGTCG GAACTGGGTG CCGCGGCTCG TCGCGTTCAT CACCTACCTG GCCGGCTTCG GCAACATCGC CTCGGCGATC TCGCCGGGCT TCCGGCACTC CCGGGTGCAC TCGATCAGCC TCAAGGTGCC CACCGAGGTG CAGAACCTGG CCGCCGCGGC CACGCTGATG TCCGGCGTGC TGCTGGTGCT GATCGCGCAC GCGCTCAAGC GCCGCAAGAA GCGGGCCTGG TGGGTGGCGG TCGTACTGCT CATCACAGTG GTGGTCTTCC ACCTCGTGCG CTCGTTCCGC AGCGAGGACC GCGAGGCCGC GACGCACTAC CTGGGCGTGC AGATCGTCCT GACGATCGTG GTGCTGGTCC TGCTGCTGGT CTACCGCGAG GAGTTCTACG CCCTCGGCGA CCCGTACACG CGCTGGCGCG CGCTGCGCGC CTTCGTGCTC CTGGCAGCGT TCTCCTTCGC CGCCGGCATG GCCCTGATGT ACTGGCAGGG CAAGCACATC GAGAGCGACC CGACGGTCTG GGTCCGCTTC CAGCACGTCG CCCTGGGTCT GATCGGCATC GACGGCCCGG TCAACTTCAA ACGCGGCGCG ACCGACGACC TGGTCGCCGC GCTGCTCGGC GGTCTGGGCC TGATGACCGC GCTGATCGTC GGCTACCTGA TGCTGCGCCC GGCCGAGCCG ATCGCCCGGC AGTCCGCCGA GGACGACGAG CGGCTGCGCG AGCTGATCGC CAAGCAGGGC CGCCGGGACT CCCTGGCCTA CTTCGCCACC CACCGCGACA AGTCGGTGAT CTGGTCGCCC TCGGGCAAGG CCGCGATCAC CTACCGCGTG GTCTCCGGCG TGATGCTGGC CTCCGGCGAC CCGATCGGCG ACCCCGAGGC CTGGCCCGGC GCGATCAAGG TGTACGTGGA GGAGGCCGAC CGGCACGCCT GGGTGGTGGC GGTGGTCGGC TGCTCGGAGA CCGGCGGCGA GGTGTGGTGC CGCGAGGCCG ACCTGGACGC GCTGGAGCTG GGCGACGAGG CGATCTGCTA CACGGACAGG TTCAGCCTGG AGGGCCGCGC GATGCGCAAC GTGCGGCAGA TGGTGAACCG GGTCGAGCGT CAGGGCTATG AGTGCCAGGT GCGCCGGCTC AAGGACATCC CGCGCGCCGA GGTCGAGCTG ATCAAGACCG GGATCGAGGC CTGGCGCGGC TCCAGCGAGC GCGGCAGCTT CTCGATGGCG CTGGGCCCGG ACCGCTTCGG CGACCCGGGC GACGCCGAGT GCGTGGTCGC GACCGCGACC AAGGACGGCG AGGTCCGGGC GCTGATCAAC TTCGTGCCCT GGGGCACCGA CGGCATGAGC CTGGACCTGA TGGTGCGCGA CCGCGAGGCA GAGCCCGGAC TCAACGAACT GCTGATCGTC AAGGCGATGC AGGCGGCCAA GGGCCTGGGG ATCGTGCGGG CGTCGCTGAA CTTCGCGGTG TTCCGCTCCG CGCTGGAGCG CGGCGAGAAG CTCGGCGCCG GCCCGATCAC CCGGATGTGG CGCTCCACGC TGGTGTTCTT CTCGCGCTGG TACCAGATCG AGTCGCTGTA CAAGTTCAAC TCGAAGTTCC AGCCGGAGTG GGTGCCGCGG TTCGTGGCGT TCAAGAACAC CCGAGACATC CCGCGCGTGG GCTTGGCGTA CGCCGAGGCC GAGGGCTTCA TCGTCCCGCC GGGCCTGCCC TGGTCGAAGA AGGACCGGGA CGAGCGCGAG CTGGACGACC TCGACGGCGA GTGCCCTGAG CGCGAGGACT GCGACGAGGC CGAGGGCAAG GCCGACGCCG AGGGCAAGGC GGACGGCGAG GGCAAGGCGG ACGGCGAGCC GGGCACCAAG CCGGAGAACG AGCCGGAGCC GGAGAACCAG CCCGAGAACA CAGCCGAGAA CAAGCCGGGG TCCAAGCCCG AGCCCAAGCC CGGCTACCGG GCCGGCGGCA AAGCCGAGAA CACCGCGAAG CGCCCGGTCG CCGAGCCCGT GGCCGCGCTT CGCGGGCCGG GAGGACAGAA GGCCGCGAAC GGCTAG
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Protein sequence | MTRAKAMTSK TEPPPSDTAA VQPPPRRNWV PRLVAFITYL AGFGNIASAI SPGFRHSRVH SISLKVPTEV QNLAAAATLM SGVLLVLIAH ALKRRKKRAW WVAVVLLITV VVFHLVRSFR SEDREAATHY LGVQIVLTIV VLVLLLVYRE EFYALGDPYT RWRALRAFVL LAAFSFAAGM ALMYWQGKHI ESDPTVWVRF QHVALGLIGI DGPVNFKRGA TDDLVAALLG GLGLMTALIV GYLMLRPAEP IARQSAEDDE RLRELIAKQG RRDSLAYFAT HRDKSVIWSP SGKAAITYRV VSGVMLASGD PIGDPEAWPG AIKVYVEEAD RHAWVVAVVG CSETGGEVWC READLDALEL GDEAICYTDR FSLEGRAMRN VRQMVNRVER QGYECQVRRL KDIPRAEVEL IKTGIEAWRG SSERGSFSMA LGPDRFGDPG DAECVVATAT KDGEVRALIN FVPWGTDGMS LDLMVRDREA EPGLNELLIV KAMQAAKGLG IVRASLNFAV FRSALERGEK LGAGPITRMW RSTLVFFSRW YQIESLYKFN SKFQPEWVPR FVAFKNTRDI PRVGLAYAEA EGFIVPPGLP WSKKDRDERE LDDLDGECPE REDCDEAEGK ADAEGKADGE GKADGEPGTK PENEPEPENQ PENTAENKPG SKPEPKPGYR AGGKAENTAK RPVAEPVAAL RGPGGQKAAN G
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