Gene Caci_8424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8424 
Symbol 
ID8339804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9751375 
End bp9753480 
Gene Length2106 bp 
Protein Length701 aa 
Translation table11 
GC content71% 
IMG OID644961511 
Productprotein of unknown function DUF470 
Protein accessionYP_003119088 
Protein GI256397524 
COG category[S] Function unknown 
COG ID[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGGG CCAAAGCCAT GACCTCCAAG ACCGAGCCGC CCCCGTCCGA TACGGCGGCG 
GTCCAGCCGC CGCCGCGTCG GAACTGGGTG CCGCGGCTCG TCGCGTTCAT CACCTACCTG
GCCGGCTTCG GCAACATCGC CTCGGCGATC TCGCCGGGCT TCCGGCACTC CCGGGTGCAC
TCGATCAGCC TCAAGGTGCC CACCGAGGTG CAGAACCTGG CCGCCGCGGC CACGCTGATG
TCCGGCGTGC TGCTGGTGCT GATCGCGCAC GCGCTCAAGC GCCGCAAGAA GCGGGCCTGG
TGGGTGGCGG TCGTACTGCT CATCACAGTG GTGGTCTTCC ACCTCGTGCG CTCGTTCCGC
AGCGAGGACC GCGAGGCCGC GACGCACTAC CTGGGCGTGC AGATCGTCCT GACGATCGTG
GTGCTGGTCC TGCTGCTGGT CTACCGCGAG GAGTTCTACG CCCTCGGCGA CCCGTACACG
CGCTGGCGCG CGCTGCGCGC CTTCGTGCTC CTGGCAGCGT TCTCCTTCGC CGCCGGCATG
GCCCTGATGT ACTGGCAGGG CAAGCACATC GAGAGCGACC CGACGGTCTG GGTCCGCTTC
CAGCACGTCG CCCTGGGTCT GATCGGCATC GACGGCCCGG TCAACTTCAA ACGCGGCGCG
ACCGACGACC TGGTCGCCGC GCTGCTCGGC GGTCTGGGCC TGATGACCGC GCTGATCGTC
GGCTACCTGA TGCTGCGCCC GGCCGAGCCG ATCGCCCGGC AGTCCGCCGA GGACGACGAG
CGGCTGCGCG AGCTGATCGC CAAGCAGGGC CGCCGGGACT CCCTGGCCTA CTTCGCCACC
CACCGCGACA AGTCGGTGAT CTGGTCGCCC TCGGGCAAGG CCGCGATCAC CTACCGCGTG
GTCTCCGGCG TGATGCTGGC CTCCGGCGAC CCGATCGGCG ACCCCGAGGC CTGGCCCGGC
GCGATCAAGG TGTACGTGGA GGAGGCCGAC CGGCACGCCT GGGTGGTGGC GGTGGTCGGC
TGCTCGGAGA CCGGCGGCGA GGTGTGGTGC CGCGAGGCCG ACCTGGACGC GCTGGAGCTG
GGCGACGAGG CGATCTGCTA CACGGACAGG TTCAGCCTGG AGGGCCGCGC GATGCGCAAC
GTGCGGCAGA TGGTGAACCG GGTCGAGCGT CAGGGCTATG AGTGCCAGGT GCGCCGGCTC
AAGGACATCC CGCGCGCCGA GGTCGAGCTG ATCAAGACCG GGATCGAGGC CTGGCGCGGC
TCCAGCGAGC GCGGCAGCTT CTCGATGGCG CTGGGCCCGG ACCGCTTCGG CGACCCGGGC
GACGCCGAGT GCGTGGTCGC GACCGCGACC AAGGACGGCG AGGTCCGGGC GCTGATCAAC
TTCGTGCCCT GGGGCACCGA CGGCATGAGC CTGGACCTGA TGGTGCGCGA CCGCGAGGCA
GAGCCCGGAC TCAACGAACT GCTGATCGTC AAGGCGATGC AGGCGGCCAA GGGCCTGGGG
ATCGTGCGGG CGTCGCTGAA CTTCGCGGTG TTCCGCTCCG CGCTGGAGCG CGGCGAGAAG
CTCGGCGCCG GCCCGATCAC CCGGATGTGG CGCTCCACGC TGGTGTTCTT CTCGCGCTGG
TACCAGATCG AGTCGCTGTA CAAGTTCAAC TCGAAGTTCC AGCCGGAGTG GGTGCCGCGG
TTCGTGGCGT TCAAGAACAC CCGAGACATC CCGCGCGTGG GCTTGGCGTA CGCCGAGGCC
GAGGGCTTCA TCGTCCCGCC GGGCCTGCCC TGGTCGAAGA AGGACCGGGA CGAGCGCGAG
CTGGACGACC TCGACGGCGA GTGCCCTGAG CGCGAGGACT GCGACGAGGC CGAGGGCAAG
GCCGACGCCG AGGGCAAGGC GGACGGCGAG GGCAAGGCGG ACGGCGAGCC GGGCACCAAG
CCGGAGAACG AGCCGGAGCC GGAGAACCAG CCCGAGAACA CAGCCGAGAA CAAGCCGGGG
TCCAAGCCCG AGCCCAAGCC CGGCTACCGG GCCGGCGGCA AAGCCGAGAA CACCGCGAAG
CGCCCGGTCG CCGAGCCCGT GGCCGCGCTT CGCGGGCCGG GAGGACAGAA GGCCGCGAAC
GGCTAG
 
Protein sequence
MTRAKAMTSK TEPPPSDTAA VQPPPRRNWV PRLVAFITYL AGFGNIASAI SPGFRHSRVH 
SISLKVPTEV QNLAAAATLM SGVLLVLIAH ALKRRKKRAW WVAVVLLITV VVFHLVRSFR
SEDREAATHY LGVQIVLTIV VLVLLLVYRE EFYALGDPYT RWRALRAFVL LAAFSFAAGM
ALMYWQGKHI ESDPTVWVRF QHVALGLIGI DGPVNFKRGA TDDLVAALLG GLGLMTALIV
GYLMLRPAEP IARQSAEDDE RLRELIAKQG RRDSLAYFAT HRDKSVIWSP SGKAAITYRV
VSGVMLASGD PIGDPEAWPG AIKVYVEEAD RHAWVVAVVG CSETGGEVWC READLDALEL
GDEAICYTDR FSLEGRAMRN VRQMVNRVER QGYECQVRRL KDIPRAEVEL IKTGIEAWRG
SSERGSFSMA LGPDRFGDPG DAECVVATAT KDGEVRALIN FVPWGTDGMS LDLMVRDREA
EPGLNELLIV KAMQAAKGLG IVRASLNFAV FRSALERGEK LGAGPITRMW RSTLVFFSRW
YQIESLYKFN SKFQPEWVPR FVAFKNTRDI PRVGLAYAEA EGFIVPPGLP WSKKDRDERE
LDDLDGECPE REDCDEAEGK ADAEGKADGE GKADGEPGTK PENEPEPENQ PENTAENKPG
SKPEPKPGYR AGGKAENTAK RPVAEPVAAL RGPGGQKAAN G