Gene Caci_8420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8420 
Symbol 
ID8339800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9748669 
End bp9749223 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content73% 
IMG OID644961507 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_003119084 
Protein GI256397520 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG CAGCCACCGG CGAGAGCGCC GTCCGCGTCC ACACCGCCGT CCTGGCGATC 
GGCGGCAACC TCGGCGACCG CCTGGCCAAC CTGCAGTCCG CGATCGACTC CTTAGCCGAC
ACCCCGACCC TGGCCATCGC CTGGCTGTCC CCGGTCTACG AGACCGCCCC GCTGCTGGCC
GAGGGCGCCG ACCCCCAGGA CGACTACCTC AACGCGGTCC TCGGTGTGAC CTCCGCGCTG
CCGCCGGACA TGCTCCTGAT GCGCACGCAG GCGATCGAGG AAGCCCTGGG CCGCACCCGC
AAGATCCACT GGGGCGCCCG CACGATCGAC ATCGACATCG TCCAGGTCGA CGACCTGGTC
TCCGACGACC CGGAGCTGAC GCTGCCGCAC CCGCGAGCAG CGCAGCGCGC CTTCGTCCTC
GCCCCCTGGC ACGACGCGCG CCCTGATGAC GTCCTGACCG GCGCCGGACC CATCGCCGAC
CTGCTGGCCG CGCTCGGCGG GGCGGCGGCG CAGGGTGCGG CGCGGCGGGA CGATCTGGAA
CTGCTGCTGC CGTAG
 
Protein sequence
MSEAATGESA VRVHTAVLAI GGNLGDRLAN LQSAIDSLAD TPTLAIAWLS PVYETAPLLA 
EGADPQDDYL NAVLGVTSAL PPDMLLMRTQ AIEEALGRTR KIHWGARTID IDIVQVDDLV
SDDPELTLPH PRAAQRAFVL APWHDARPDD VLTGAGPIAD LLAALGGAAA QGAARRDDLE
LLLP