Gene Caci_8417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8417 
Symbol 
ID8339797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9745068 
End bp9746240 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content69% 
IMG OID644961504 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_003119081 
Protein GI256397517 
COG category[C] Energy production and conversion 
COG ID[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA TGACCTCCCA GCAGCTGACC GAGCGCGTCG CGGGCACCGG AACGGGCCTG 
GAGACCACCG ACATGGTGCT CAACATCGGC CCGCAGCACC CGGCCACCCA CGGTGTGCTG
CGCCTGCGGC TGGTCCTGGA CGGCGAGCGC ATCGTCTCGG CCGACCCGAT CATCGGCTAC
ATGCACCGCG GCGCCGAGAA GCTCTTCGAG GTCCGCGACT ACCGGCAGAT CATCGTGCTG
GCCAACCGGC ACGACTGGCT GTCGGCGTTC GCCAGCGAGC TCGGCGTGGT GCTGGCGGTC
GAGCGGATGC TGGGGATGGA GGTCCCCGAG CGCGCCACCT GGGCCCGCAC CCTGCTGGCG
GAGCTGAACC GGATTCTCAA CCACCTGATG TTCCTGGGCT CCTATCCCCT GGAACTGGGC
GCGATCACGC CGATCTTCTA CGCGTTCCGC GAGCGCGAGG AGATCCAGGC GGTGATGGAG
GAGATCTCCG GCGGCCGCAT GCACTTCATG TTCAACCGGG TCGGCGGGCT GAAGGACGAG
CTGCCGCTGG GCTGGACCGA CCGGGTCCGG GCGGCGATCG CGACCGTGCG CTCCCGGATG
TCCGACATCG ACCGGCTGAT CACCGGCAAC GAGATCTTCC GGGCCCGCAC CCGGGGCGTC
GGGGTCCTGA CCCCCGAGCA GATCGCGGCG TATGGGGTGT CCGGGCCGAT CGCCCGCGCC
TCGGGCGTCG ACTTCGACCT GCGCCGCGAC GATCCCTACC TGGCGTACGG CGAGCCGGAG
GTGCGCGAGA AGCTGAAGGT CGTCACCGGC CGCGGCGGCG ACTGCCTGGC GCGCTTCGAG
GTGCTGCTGG AGCAGGCGTA CAACTCCCTG GACATCGCCC AGGCCTGCGC CGACAAGCTG
GACACGCTGC CCACCGGGCC GATCAACCAG CGGCTGCCGA AGATCCTGAA GGTTCCCGAG
GGCCACACCT ACGCCTGGAC CGAGAACCCG CTGGGCATCA ACGGCTACTT CCTGGTCTCG
CACGGCGACA AGACCCCGTG GCGGCTCAAG CTGCGCTCGG CGTCGTTCAA CAACATCCAG
GTGCTGGCCG AGGTGCTGCC CGGGCATCTG GTGTCGGACA TGGTCGCGAT CCTGGGATCG
ATGTTCTTCG TGGTCGGCGA CGTCGACAAG TGA
 
Protein sequence
MTGMTSQQLT ERVAGTGTGL ETTDMVLNIG PQHPATHGVL RLRLVLDGER IVSADPIIGY 
MHRGAEKLFE VRDYRQIIVL ANRHDWLSAF ASELGVVLAV ERMLGMEVPE RATWARTLLA
ELNRILNHLM FLGSYPLELG AITPIFYAFR EREEIQAVME EISGGRMHFM FNRVGGLKDE
LPLGWTDRVR AAIATVRSRM SDIDRLITGN EIFRARTRGV GVLTPEQIAA YGVSGPIARA
SGVDFDLRRD DPYLAYGEPE VREKLKVVTG RGGDCLARFE VLLEQAYNSL DIAQACADKL
DTLPTGPINQ RLPKILKVPE GHTYAWTENP LGINGYFLVS HGDKTPWRLK LRSASFNNIQ
VLAEVLPGHL VSDMVAILGS MFFVVGDVDK