Gene Caci_8406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8406 
Symbol 
ID8339786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9733788 
End bp9734621 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content76% 
IMG OID644961493 
Productregulatory protein GntR HTH 
Protein accessionYP_003119070 
Protein GI256397506 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGTCG AGGGATGGAA TGTCCACCGG GTCATCCGGC CCGCCCGCCT CGCCAACGCC 
GTCGTCGAGC GGCTGCTGCT GCGCATACTG GAAGGCGAGT TCCCGCCGGG CACCGATCTG
CCCCCGGAGG CGGCGCTCGC GGCCGAGTTC GCGGTCAGCC GTACCATCCT GCGCGAGGCG
CTCAAGGCCC TGGAGGAGAA GCGCGTCCTG CGCATCCGCC ACGGCCGCGG CACCACGGTC
CGCCCCAAGG CCGAGTGGAA CCTGCTCGAC CCGCTGGTCC TGAGCGTGCA GCTGGAGTAC
GAATCCTCCC CGGAGCTGGT CGCCGAGCTC GGCGAGGTCC GCACGGCCCT GCTGACGCTG
ATGGCCGAGC TGGCCGCCCG CCGCGTCCAC CCGCCCCAGC GCGAGCAGCT GGCCGCGGCC
CTGGAGCGCA TGCGCGCCGC CGTGGAGGAC CCCGGTCCGT TCCACGAGGC GGCGACGGCC
TTCACCCGCA CCCTGGCCGA GGCGGCGGGC AACGAGGTGG CGCGCTGCGT CATCGAGACC
ATCGACGTCC CGCACGGCGG CCAGGACGAC AACCCGGCCA AGCTCATCGA GACGATGAAG
CTCCGCCTGC TGCTGGCCGA GGCGGCGCAC GCCACGGTCG CCGCGGGCCC GGGCGCCCCG
GCCGGCTCCG CACCGGTCCC GGCGCCGACG AGCTCGCCCG CGGCGCCCGG CGCCCCGGTC
CCGGCGCCGG CCACCGCCCC CGGCGCGCAG CCGCTGCGCC AGGGCCAGGC CGCGACGGTC
CCGCTGAACC GGCACGGCGT GCGGACGCCG ATGCCGCAGT CGGCCCGCGT GTAG
 
Protein sequence
MYVEGWNVHR VIRPARLANA VVERLLLRIL EGEFPPGTDL PPEAALAAEF AVSRTILREA 
LKALEEKRVL RIRHGRGTTV RPKAEWNLLD PLVLSVQLEY ESSPELVAEL GEVRTALLTL
MAELAARRVH PPQREQLAAA LERMRAAVED PGPFHEAATA FTRTLAEAAG NEVARCVIET
IDVPHGGQDD NPAKLIETMK LRLLLAEAAH ATVAAGPGAP AGSAPVPAPT SSPAAPGAPV
PAPATAPGAQ PLRQGQAATV PLNRHGVRTP MPQSARV