Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8406 |
Symbol | |
ID | 8339786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9733788 |
End bp | 9734621 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644961493 |
Product | regulatory protein GntR HTH |
Protein accession | YP_003119070 |
Protein GI | 256397506 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGTCG AGGGATGGAA TGTCCACCGG GTCATCCGGC CCGCCCGCCT CGCCAACGCC GTCGTCGAGC GGCTGCTGCT GCGCATACTG GAAGGCGAGT TCCCGCCGGG CACCGATCTG CCCCCGGAGG CGGCGCTCGC GGCCGAGTTC GCGGTCAGCC GTACCATCCT GCGCGAGGCG CTCAAGGCCC TGGAGGAGAA GCGCGTCCTG CGCATCCGCC ACGGCCGCGG CACCACGGTC CGCCCCAAGG CCGAGTGGAA CCTGCTCGAC CCGCTGGTCC TGAGCGTGCA GCTGGAGTAC GAATCCTCCC CGGAGCTGGT CGCCGAGCTC GGCGAGGTCC GCACGGCCCT GCTGACGCTG ATGGCCGAGC TGGCCGCCCG CCGCGTCCAC CCGCCCCAGC GCGAGCAGCT GGCCGCGGCC CTGGAGCGCA TGCGCGCCGC CGTGGAGGAC CCCGGTCCGT TCCACGAGGC GGCGACGGCC TTCACCCGCA CCCTGGCCGA GGCGGCGGGC AACGAGGTGG CGCGCTGCGT CATCGAGACC ATCGACGTCC CGCACGGCGG CCAGGACGAC AACCCGGCCA AGCTCATCGA GACGATGAAG CTCCGCCTGC TGCTGGCCGA GGCGGCGCAC GCCACGGTCG CCGCGGGCCC GGGCGCCCCG GCCGGCTCCG CACCGGTCCC GGCGCCGACG AGCTCGCCCG CGGCGCCCGG CGCCCCGGTC CCGGCGCCGG CCACCGCCCC CGGCGCGCAG CCGCTGCGCC AGGGCCAGGC CGCGACGGTC CCGCTGAACC GGCACGGCGT GCGGACGCCG ATGCCGCAGT CGGCCCGCGT GTAG
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Protein sequence | MYVEGWNVHR VIRPARLANA VVERLLLRIL EGEFPPGTDL PPEAALAAEF AVSRTILREA LKALEEKRVL RIRHGRGTTV RPKAEWNLLD PLVLSVQLEY ESSPELVAEL GEVRTALLTL MAELAARRVH PPQREQLAAA LERMRAAVED PGPFHEAATA FTRTLAEAAG NEVARCVIET IDVPHGGQDD NPAKLIETMK LRLLLAEAAH ATVAAGPGAP AGSAPVPAPT SSPAAPGAPV PAPATAPGAQ PLRQGQAATV PLNRHGVRTP MPQSARV
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