| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8397 |
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| Symbol | |
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| ID | 8339777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9723392 |
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| End bp | 9724744 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644961484 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_003119061 |
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| Protein GI | 256397497 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.331409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.967626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGCG GATTAGGGAC CGGGACGGGA CGCCGATCCG GGACGGGAGG TAACCGCGTG
GTGTCGGGGC CGGAGGATTT CGCCGCTCTG CTGGGGGATT TGAAGGAGCG GTCAGGGCTC
AGTTATGGGG TCTTGGCGAA GCGGCTGCAT GTGGGGACCT CGACGCTGCA CCGGTATGTG
CAGGGGGAGA CGGTGCCTCC GGAGTACGGC GTCATAGAGA AGTTCGCGCG GCTGACCGGA
GCTTCCGCCA CGGAGATGGC GACGCTGTAT CGGCTGTGGA TGGCGGCGGG CGAGGCGCGT
TCCTCAACGG TTGCTGAGGC GGTTTCCGTT GTTCCTCCCG CTCCTCCCGC GCCTCCGGTT
TCTCCCGTAG AGGACTCTTC TGGCGATTCC TCTATAGCGA CTACTCCGTC TCCGGTTTCA
CGGAGGCGGC GACGTCTGCT TCCGGCCTTG GCCGTGCTCG CCGTGGTGGG CGTCGGAGCG
GCTGTTGCGG GTGTCGCGTT TGCCTCATCT CCGGGATCAA ACTCTGACCG GACCGCAGCT
TCGACAGTGA GCAGTTCGAC GTCGAGTCCT CTACAGAGTT CGTCTTCTCT ACAGAGTCCG
CCTAGCGCTT CTGCCCCTAG TAGCTCCTCT ACTGGAGCCG CCACTGGTAG CAGCGCCAGC
TCCGCTCCCT CTAACTCTTC CTCCTCTACC TCTCCCTCGA CCTCTCCCTC CACTTCGTCC
GCTCCTCCTA TAGCGGTGAC CATCCGTCCC TATCAGTGGG AAGACAAGTG CGAGCAGTGG
TACTTGCTCA ACAAGAAGCC CGGCGAAGTC CCTCCTCCGC CGACCGAGGC GGATGCGCGG
GGATGGGCCA GTGCGCTGGG CGCCGTGTCG GCCGGGACCA TGAAGATCGA GCTGTCGGTC
CAGGGGACGT CTTCGAGCAC GGTGGTGCTG CAAGGGCTGC ATGTCCGGAC GGTCAGTAAG
GCCGCGCCGC TTCCGTGGTC CGCGTACTCC ATGGCGTCGG GATGCGGAGG CGGTCTGATG
CCCGTGTCGT TCAGCATCAA CTTGGACGCC GACCGGCCAC TCGCGAGTCC GAAGGCCGGG
CAGCAGGGCG ACAATGTGGT GCGCGCAGAG GACTTCCCTT TTGAGGTTTC CGAATCCGAC
CCGCAGGTGT TGACCGTCTA TGCGCATGCG CACACGGTGA ACGCAGCGTG GTACCTGGAG
CTGGACTGGA GTAGTGGCAG CCGGACCGGA ACAGTCCGGA TCGACGATCA CGGCAAGCCG
TTCCAGACCA GCGGCGCGCA GGGGCGTCCG ATCTACGACT ACGACACCAG CTCGAACGAC
TGGGAGCCCG ACACCACTGC TGTTGTGCAG TAG
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| Protein sequence | MSCGLGTGTG RRSGTGGNRV VSGPEDFAAL LGDLKERSGL SYGVLAKRLH VGTSTLHRYV
QGETVPPEYG VIEKFARLTG ASATEMATLY RLWMAAGEAR SSTVAEAVSV VPPAPPAPPV
SPVEDSSGDS SIATTPSPVS RRRRRLLPAL AVLAVVGVGA AVAGVAFASS PGSNSDRTAA
STVSSSTSSP LQSSSSLQSP PSASAPSSSS TGAATGSSAS SAPSNSSSST SPSTSPSTSS
APPIAVTIRP YQWEDKCEQW YLLNKKPGEV PPPPTEADAR GWASALGAVS AGTMKIELSV
QGTSSSTVVL QGLHVRTVSK AAPLPWSAYS MASGCGGGLM PVSFSINLDA DRPLASPKAG
QQGDNVVRAE DFPFEVSESD PQVLTVYAHA HTVNAAWYLE LDWSSGSRTG TVRIDDHGKP
FQTSGAQGRP IYDYDTSSND WEPDTTAVVQ
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