Gene Caci_8395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8395 
Symbol 
ID8339775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9722484 
End bp9722846 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content69% 
IMG OID644961482 
Productprotein of unknown function DUF488 
Protein accessionYP_003119059 
Protein GI256397495 
COG category[S] Function unknown 
COG ID[COG3189] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.313656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.617254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCG ACTATCGGGT GAAGCGGGCT TATGACGCGG CGGCGAAGGC TGATGGGAAG 
CGGGTCCTGG TGGACCGGTT GTGGCCGCGG GGGGTGAGCC GGGAGGCCGC CGAGCTCGAT
CTGTGGGCCA AGGACGCGAC GCCCTCCAAC GACCTGCGGA AGTGGCTGCA CGGGCATCGC
GACGAGTACG GCGAGTTCGT CGGACGCTAC AACGCCGAAC TTGACGGCGA CGCGCAGCAG
GCAGCCCTGG CGGAGATCCG CGCACTGCAC GCCAAGCACA CCGTCACGCT CGTCACCGCC
GCCAAGGACG TCGACGACAG CCACGTGCCC GTCCTGCTCA AGCGGCTGCG GGAGGGCGAG
TAG
 
Protein sequence
MSGDYRVKRA YDAAAKADGK RVLVDRLWPR GVSREAAELD LWAKDATPSN DLRKWLHGHR 
DEYGEFVGRY NAELDGDAQQ AALAEIRALH AKHTVTLVTA AKDVDDSHVP VLLKRLREGE