Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8391 |
Symbol | |
ID | 8339770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9718493 |
End bp | 9719347 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644961477 |
Product | PSP1 domain protein |
Protein accession | YP_003119055 |
Protein GI | 256397491 |
COG category | [S] Function unknown |
COG ID | [COG1774] Uncharacterized homolog of PSP1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.143768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTGTG CCGTCAGCTT CACCCGCTAC GGCCGTCTCT ATTACTACGC GCCAGGGTCC ATCAGCCCGC ACGTCGGCGA CAAGGTACTC GTCCCCACCT CCGCGGGTCC CGAGGTGGCG GAGTGCATCT GGGCGCCCCA ATGGGTCGAC ACATATGACG ACGCGGGGAT CGGCGGACTG GACGATCTCG TCGGCTTCGC CACCCCGGAC GACTTGGCGC GCGACGAACG CAGCCGGGAG CGCCGCGCGC GGGCCCGCGT GGTCGCCAAG CGCCAGATCC GCGAGCAGGG TCTGCCGATG AAGGTGGTCG GCGTCGACTT CGTGGAGTCG GAGAAGCAGA TCACCGTGTA CTTCTCCGCT CCGCAGTACG TGGACTTCCG CGAACTGGTG CGGACCCTCG CCCGGGAGTT GGACGCGCGC ATCGAGCTGC GTCAGCTCGG CGCCCGCGAC GAGGCGCGCA TCCAGGGCGG GATCGGACCG TGCGGACGGG ACACGTGCTG CTCGACGTTC CTTAAGGACT TCGAGCCTGT GTCGGTACGC ATGGCCAAGG ACCAGGACCT GCCGGTGAAT CCGTTGAAGA TCTCCGGTGC GTGCGGACGG CTTATGTGTT GTCTCAAATA TGAGCATCCG CTCTATGTAG AGACCAAGGC CAAGGCTCCC GCGCGCGGGG AGAAGGTCGT GACACCGGAG GGTCCGGGGC GGGTCGTCGG ACTGAACGTG CCGTCGGAGA CGGTGAAGGT GCGGCTGGAC GAGACGGGGC GGACGTGCTC CTGCTCGCTC GCGTCGGTGT GCGGATCGCG GCAGGACTAT GAGGGTTCGC GCAAGGACGG CTCTATGCGG TGGGACGCGG AGTAA
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Protein sequence | MICAVSFTRY GRLYYYAPGS ISPHVGDKVL VPTSAGPEVA ECIWAPQWVD TYDDAGIGGL DDLVGFATPD DLARDERSRE RRARARVVAK RQIREQGLPM KVVGVDFVES EKQITVYFSA PQYVDFRELV RTLARELDAR IELRQLGARD EARIQGGIGP CGRDTCCSTF LKDFEPVSVR MAKDQDLPVN PLKISGACGR LMCCLKYEHP LYVETKAKAP ARGEKVVTPE GPGRVVGLNV PSETVKVRLD ETGRTCSCSL ASVCGSRQDY EGSRKDGSMR WDAE
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