Gene Caci_8379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8379 
Symbol 
ID8339758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9706813 
End bp9707601 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content67% 
IMG OID644961465 
Productpantothenate kinase 
Protein accessionYP_003119043 
Protein GI256397479 
COG category[K] Transcription 
COG ID[COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor 
TIGRFAM ID[TIGR00671] pantothenate kinase, type III 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.414781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTCTGA CCATTGACGT CGGCAACACC CAGACCGTCT ACGGCCTGTT CGAGGGCGAG 
GAGATCGTCG ACCACTGGCG GGTCGCCACG GACCCGCGGC GGACCTCGGA CGAGCTGTCG
GTGATGACGC AGGGACTGCT GAGCCAGCAC TCGACGGCCG GCAAGCCCGG CGGGCTCACA
GGGTTGTCGA TCTGTTCCAC GGTGCCCTCG GTGCTGCACG AGATGCGGGA CATGAGCAAG
CGGCACTACG GCGACGTCCC GACGGTGATG GTGGAGCCCG GGGTGAAGAC CGGGGTGCCG
ATCCTGGTCG ACAACCCCAA GGAAGTCGGC GCGGACCGCA TCATGAACGC GCTCGCGGCG
CACTACCTGT ACGACGGACC GGTGATCGTG GTCGACTTCG GGACCGCGAC GTCCTTCGAC
GCGGTCTCGG CCAAGGGCGA GTTCTTAGGC GGGGCGATAG CGCCCGGGAT AGAGATATCG
GTCGAGGCGC TGGGGATGCG CGGGGCGCAG CTGCGCAAGA TCGAGCTGAC GAAGCCGCGG
AGCATCATCG GGAAGAACAC TGTCGAGTGC ATGCAGTCGG GAATCCTCTA TGGGTTCGCC
GGGCAGGTCG ACGGAGTGGT GCACCGGATG GCCGAGGAGA TGGCCGAGGA TCCGGACGAC
GTGACGGTGG TCGCCACCGG CGGGCTCGCG GCGCTGGTGC TGGACGAGTC CGAAGTGGTG
GACGTGCACG AGCCGTGGCT GACGCTGGTC GGGCTGCGGC TGGTGTACGA GCGGAACAGC
GCGAGCTGA
 
Protein sequence
MLLTIDVGNT QTVYGLFEGE EIVDHWRVAT DPRRTSDELS VMTQGLLSQH STAGKPGGLT 
GLSICSTVPS VLHEMRDMSK RHYGDVPTVM VEPGVKTGVP ILVDNPKEVG ADRIMNALAA
HYLYDGPVIV VDFGTATSFD AVSAKGEFLG GAIAPGIEIS VEALGMRGAQ LRKIELTKPR
SIIGKNTVEC MQSGILYGFA GQVDGVVHRM AEEMAEDPDD VTVVATGGLA ALVLDESEVV
DVHEPWLTLV GLRLVYERNS AS