Gene Caci_8371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8371 
Symbol 
ID8339750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9697823 
End bp9700375 
Gene Length2553 bp 
Protein Length850 aa 
Translation table11 
GC content69% 
IMG OID644961457 
ProductATPase AAA-2 domain protein 
Protein accessionYP_003119035 
Protein GI256397471 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAC GGTTCACCGA CCGCGCACGG CGCGTCGTCG TCCTGGCCCA AGAAGAGGCC 
AGGATGCTCA ACCACAACTA CATCGGGACC GAGCACATCC TCCTCGGCCT CATCCACGAG
GGTGAGGGTG TGGCGGCCAA GGCTCTGGAG AGCCTCGGCA TCTCGCTGGA AGCGGTCCGC
CAGCAGGTGG AGGAGATCAT CGGCCAGGGC CAGCAGGCTC CGTCCGGGCA CATCCCCTTC
ACCCCGCGGG CCAAGAAGGT CCTGGAGCTC TCGCTGCGCG AGGCGCTGCA GCTGGGCCAC
AACTACATCG GTACCGAGCA CATCCTGCTC GGCCTGATCC GCGAGGGCGA GGGTGTCGCC
GCGCAGGTCC TGGTCAAGCT GGGCGCGGAC CTGAACCGGG TGCGCCAGCA GGTCATCCAG
CTGCTGTCGG GCTACTCCGG CGGCGGCAAG GAGGCCGCGG CGGCCGGCGG TCCGGCCGAG
GGCACGCCGT CCACCTCGCT GGTCCTGGAC CAGTTCGGCC GGAACCTGAC CCAGGCCGCC
CGGGAGGGCA AGCTCGACCC GGTCATCGGC CGGGAGAAGG AGATCGAGCG GGTCATGCAG
GTGCTGTCCC GCCGCACCAA GAACAACCCG GTGCTGATCG GCGAGCCCGG CGTCGGCAAG
ACCGCCGTCG TGGAGGGCCT GGCCCAGGCG ATCGTCAAGG GCGAGGTGCC CGAGACGCTC
AAGGACAAGC ACCTGTACAC CCTGGACCTC GGCGCCCTGG TGGCCGGCTC GCGCTACCGC
GGCGACTTCG AGGAGCGCCT GAAGAAGGTG CTCAAGGAGA TCCGCACCCG CGGCGACATC
GTCCTGTTCA TCGACGAGCT GCACACCCTG GTCGGCGCGG GCGCGGCGGA GGGTGCCATC
GACGCGGCCT CGATCCTGAA GCCCATGCTG GCCCGCGGCG AGCTGCAGAC CATCGGCGCC
ACCACGCTCG ACGAGTACCG CAAGTACGTC GAGAAGGACG CCGCCCTGGA GCGCCGCTTC
CAGCCGATCC AGGTGGCCGA GCCCTCGGTG GCGCACACCA TCGAGATCCT CAAGGGCCTG
CGGGACCGCT ACGAGGCGCA CCACCGGGTG TCCATCACCG ACAGCGCGCT GGTGGCCGCC
GCCACGCTGG CCGAGCGCTA CATCTCCGAC CGCTTCCTGC CGGACAAGGC GATCGACCTG
ATCGACGAGG CGGGCTCCCG GATGCGCATC CGCCGGATGA CCGCGCCGCC GGACCTGCGC
GAGTTCGACG ACAAGATCGC GAACGTCCGC AAGGAGAAGG AGTCCGCGAT CGACGCGCAG
GACTTCGAGA AGGCCGCGGC GCTGCGCGAC CAGGAGAAGC AGCTCCAGGG CGCCAAGGCG
CGCCGGGAGA AGGAGTGGAA GCAGGGCGAC CTGGACGTCG TGGCCGAGGT CGACGAGGAG
CTGATCGCCG AGGTCCTGGC CACCGCCACG GGCATCCCGG TCTTCAAGCT CACCGAGGAG
GAGACCTCCC GCCTGCTGCG CATGGAGGAC GAGCTGCACA AGCGCGTCAT CGGCCAGAAC
CAGGCGATCA AGGGCCTGTC CCAGGCGATC CGGCGCACCC GCGCCGGGCT GAAGGACCCC
AAGCGCCCCG GCGGCTCGTT CATCTTCGCC GGCCCGTCCG GCGTCGGTAA GACCGAGCTG
GCCAAGGCCC TGGCGGAGTT CCTGTTCGGC GACGAGGACG CGCTGATCCA GCTGGACATG
TCCGAGTTCT CCGAGAAGCA CACCGTCTCG CGGCTGTTCG GCTCCCCGCC CGGATACGTC
GGCTACGAGG AGGGCGGCCA GCTCACCGAG AAGGTGCGCC GCAAGCCGTT CTCGGTGGTC
CTGTTCGACG AGGTCGAGAA GGCGCACCCG GACATCTTCA ACTCCCTGCT GCAGATCCTG
GAGGACGGCC GCCTGACCGA CTCCCAGGGC CGGGTGGTGG ACTTCAAGAA CACGGTGATC
ATCATGACCA CCAACCTCGG CACCCGGGAC ATCTCCAAGG GCTTCGGCCT GGGCTTCGCG
GCCTCCGGGG ACACCAAGGC GCCGTACGAG CGGATGAAGG CCAAGGTCAA CGACGAGCTG
AAGCAGCACT TCCGCCCGGA GTTCCTGAAC CGCGTCGACG ACACGGTGGT CTTCCCGCAG
CTGAGCCAGG ACGACATCGT GGCCATCGTG GACCTGATGA TGAGCAAGGT CGACGGCCGC
CTGAAGGACA AGGACATGGG CATCGTCCTG ACCCGCAAGG CCAAGGAGCT CATTGCTTCT
CTGGGCTACG ACCCGGTCCT GGGCGCCCGG CCGCTGCGCC GCGCGATCCA GCGCCACATC
GAGGACCCGC TGTCGGAGAA GATCCTGTTC GGCGAGATCC GCTCGGGCCA GCTGATCACG
GTGGACGAGA ACACCGAGAC CGGCGCGGTC GAGTCCGACC AGCGCTTCAC CTTCAAGGCC
GGCCCGAAGG AGGACGTCCC GGAGGACGCC TCGGTGCTGG AGTCCGGCAC GCTGCCGCCC
GCCCCGGAGG CCACGCCGCC GGTCAGCGCG TGA
 
Protein sequence
MFERFTDRAR RVVVLAQEEA RMLNHNYIGT EHILLGLIHE GEGVAAKALE SLGISLEAVR 
QQVEEIIGQG QQAPSGHIPF TPRAKKVLEL SLREALQLGH NYIGTEHILL GLIREGEGVA
AQVLVKLGAD LNRVRQQVIQ LLSGYSGGGK EAAAAGGPAE GTPSTSLVLD QFGRNLTQAA
REGKLDPVIG REKEIERVMQ VLSRRTKNNP VLIGEPGVGK TAVVEGLAQA IVKGEVPETL
KDKHLYTLDL GALVAGSRYR GDFEERLKKV LKEIRTRGDI VLFIDELHTL VGAGAAEGAI
DAASILKPML ARGELQTIGA TTLDEYRKYV EKDAALERRF QPIQVAEPSV AHTIEILKGL
RDRYEAHHRV SITDSALVAA ATLAERYISD RFLPDKAIDL IDEAGSRMRI RRMTAPPDLR
EFDDKIANVR KEKESAIDAQ DFEKAAALRD QEKQLQGAKA RREKEWKQGD LDVVAEVDEE
LIAEVLATAT GIPVFKLTEE ETSRLLRMED ELHKRVIGQN QAIKGLSQAI RRTRAGLKDP
KRPGGSFIFA GPSGVGKTEL AKALAEFLFG DEDALIQLDM SEFSEKHTVS RLFGSPPGYV
GYEEGGQLTE KVRRKPFSVV LFDEVEKAHP DIFNSLLQIL EDGRLTDSQG RVVDFKNTVI
IMTTNLGTRD ISKGFGLGFA ASGDTKAPYE RMKAKVNDEL KQHFRPEFLN RVDDTVVFPQ
LSQDDIVAIV DLMMSKVDGR LKDKDMGIVL TRKAKELIAS LGYDPVLGAR PLRRAIQRHI
EDPLSEKILF GEIRSGQLIT VDENTETGAV ESDQRFTFKA GPKEDVPEDA SVLESGTLPP
APEATPPVSA