Gene Caci_8368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8368 
Symbol 
ID8339747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9694937 
End bp9695803 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content75% 
IMG OID644961454 
ProductXRE family transcriptional regulator 
Protein accessionYP_003119032 
Protein GI256397468 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGCC GTCTCGCGCC CGAAGACGTC GGGCTGCGCA GCGTCGGCCG CCGGCGCACA 
CCAGGCTTGC GGCGCCAGGA GGTCGCCGAA CTCGCCGCGG TCAGCATCGA CTGGTACATC
CGGCTGGAGC AGGGACGCGC CGGCGCACCC GGCTCGGCGG TGCTCGACGC CCTCGCCGAG
GCGCTGCGCC TATCGCCGGT CGAGCGCGAG TACCTGCACC TGACGGCGCG CGGCGAGGCG
CCGCCGCGTC CGCTGCTCGA CCAGCGCGGC GGCGTGACCA CCTCGCTGCG CGCGATCCTG
GACGGCATGC CGATGCTGCC GGCGTACGTC GTGGACCACA GCTTCGACAT CCTGGCGCAC
AACGCGGCGG CGACCGCCAT GTTCGGCGAC GGATTCGGCC ACGGCACCGC CTCCAACGTG
GCGCTGCTGT TGTTCCTGGA CCCGGACGCG CGCCGCGGCC AGCTGAACTG GGAGCAGATC
GCCCGCGAGA CGGTCGGCGC CCTGCGGGCC AACGCGGCGA AGTACCCCGA CGACCCCCGC
ATGCAGGCGG TGATCGCCCG CCTGCGCGCC GGCCACCGCG ACTTCGCCGC CTGGTGGGGC
GACCACACCG TCGGCGAGCG CTGCAGCGGC GTGAAGCGCG TGGCGCACCC GGCGGCCGGC
GTGCTGACCG TGTCCTACGA CATGTTCTCG GCGCCGGAGG CCTCCGAGCA GCGGCTGATG
GTGCTGACAC CGGTCGACGC GGAGTCGGAG GTACGGCTGC GCGGGTTGGT GACGGCGCAC
TCGCGGCGGG TCGCGCGCGA GGCGGGGGAC GAGAGCGGGG TGGGGGAGGC GGAGAAAGTG
GAGAAGGCTG CGGTGTTGGC GGGGTGA
 
Protein sequence
MRGRLAPEDV GLRSVGRRRT PGLRRQEVAE LAAVSIDWYI RLEQGRAGAP GSAVLDALAE 
ALRLSPVERE YLHLTARGEA PPRPLLDQRG GVTTSLRAIL DGMPMLPAYV VDHSFDILAH
NAAATAMFGD GFGHGTASNV ALLLFLDPDA RRGQLNWEQI ARETVGALRA NAAKYPDDPR
MQAVIARLRA GHRDFAAWWG DHTVGERCSG VKRVAHPAAG VLTVSYDMFS APEASEQRLM
VLTPVDAESE VRLRGLVTAH SRRVAREAGD ESGVGEAEKV EKAAVLAG