Gene Caci_8347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8347 
Symbol 
ID8339726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9671551 
End bp9672468 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content71% 
IMG OID644961433 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_003119011 
Protein GI256397447 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA TCTCGGCGAT GGCCGCGTTC AGCGGCGGAC TGGCCGACCT GATCGAGCAG 
GTGATGCCGA ACGTCGTGGC CATTCGGGGC GAGCAGGGCC CGGACTCCTG GACCGCGGGC
TCCGGATTCG TCCTGGACGA CGCCTGCCAC GTCGTGACCA ACAACCACGT CGTGGACCAG
CCGGAGGGGT TCACCTGGAC CGCGGCGATC CACGGCTTTC CCACCCAGCC GATCCGGATC
CTGGGCCGCG ACCCCCTGAC CGACCTCGCC GTGGTCGAGC TCTCCGAACC ACACGCCTCG
GCACTCGCGC TGCGCGACCG CCCGGTCCGG CTCGGCGAGT TCGTCCTGGC GATGGGCAAC
CCGCTCGGCG ACTACCCGGA ATCAGTCTCG GTGGGCATCG TCAGCGGCCT GTCCCGCCAA
CTCCAGGCCG CCCAGCACGA ACGCCCCCTG CAACGCCTGA TCCAGACCGA CGCCGCGGTG
AACCCCGGCA ACTCCGGCGG CCCGCTGGTC GACCTGGACG GCGCCGTAAT CGGCGTCAAC
ACCATGATCC GCGACGACGC CCAGGGCATG GCCTTCGCCG TCCCGGCGGC GACCGTCGCC
CGCGTCATCC CGCAGCTGAT CGCCGAGGGC CGCGTCACCC GCGCCTCCCT CGGCATCGCC
GTCCACATCC GCGACGCCGA AGTGGACGGA CGCACCACCA AGCGCGAGAT CGTGACCCGA
GCACGCGACA CCGACAGCCC CTTCCACCCC GGCGACGTCC TGATCAGCCT CGCCGGCCAG
GACATCGACG GGCACGCAGG ACTGTTCGAC CTCCTGGACG CGGCGCTGAT CGGCAAGGAG
ACGCCGGTCG AGGTTGTGCG TGAGGGCAAG CGGGTCGCTT TCGACGTGGT GCCGAGGCGG
CTGGCCGAGC GGAAGTAG
 
Protein sequence
MSAISAMAAF SGGLADLIEQ VMPNVVAIRG EQGPDSWTAG SGFVLDDACH VVTNNHVVDQ 
PEGFTWTAAI HGFPTQPIRI LGRDPLTDLA VVELSEPHAS ALALRDRPVR LGEFVLAMGN
PLGDYPESVS VGIVSGLSRQ LQAAQHERPL QRLIQTDAAV NPGNSGGPLV DLDGAVIGVN
TMIRDDAQGM AFAVPAATVA RVIPQLIAEG RVTRASLGIA VHIRDAEVDG RTTKREIVTR
ARDTDSPFHP GDVLISLAGQ DIDGHAGLFD LLDAALIGKE TPVEVVREGK RVAFDVVPRR
LAERK