Gene Caci_8346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8346 
Symbol 
ID8339725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9670319 
End bp9671470 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content68% 
IMG OID644961432 
Productband 7 protein 
Protein accessionYP_003119010 
Protein GI256397446 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGCT ACCGAGTACC CGCCCCTGAC CAGGCGATGC TCATCTCCGG CGGCCGCCGG 
GGGCAGGGCG GTGCCCCGTT CCGGGTCGTC ACCGGCCACG GCAAGTTCAT CCTCCCGGTG
TTCCGCAAGA CCCGCTTCCT GACGCTGTCC ATGCAGGAAG CCGAAGTCTC CGAGACCTGT
GTGACCAAGC AGGGCATCGC CCTGACCGTG ACCGCGGTCA TCGCCTTCAA GGTCGGCAAC
GACACCGAGA GCATCGTCAA CGCCGGCCAG CGGTTCCTGT CCGACCAGAA CCAGATGTCG
ACCCTGACCG CCCGCATCTT CGCCGGCCAC CTGCGCTCCA TCATCGGCTC GATGACCGTC
GAGGAGATCG TCACCGAGCG CCAGAAGCTG GCCGAGGAGG TGCTCGACAC CTCCAAGTCC
GAGATGGGCA AGATCGGCCT GACCGTCGAC TCCCTGCAGA TCATGTCCAT CGACGACATG
AAGACCGGCT ACATCGACGC CATGGCCGCC CCGCACAAGG CCGCCATCCA GCGCCAGGCC
CAGATCGCCC AGGCCCAGGC CACCCAGGCC TCGGTCGAGG CCCAGCAGGA AGCCGAGCGC
AACAAGGCCG AGTACGCCCG CCAGACCGCC ATCGTGCAGG CCAAGTACAA GGCCGAAGTC
GACCAGGCCC AGGCCATAGC GGCCCAGGCC GGCCCGCTGT CCGCGGCCCA GGCCCAGCAG
GAAGTCCTGA TGGCCCAGAC CGAACTGGCC CAGCGCAACG CCGAACTCCG CCAGCAGCAA
CTCGTCGCCG AGGTCGTCAA GCCCGCCGAA GCCGAAGCCG AACGCGTCCG CATCACCGCC
GCCGCCGAAG CCGAACGCAT GCGCGTCCAA GCCGAAGCCG CCGCCAGCTA CGACCGCGTA
GCCCTCGACC GCATGATCAT CGACCAGCTC CCCCTCATCG TCGAAAAGGC CGCAGCAGGC
CTCAACGGCG CCAACATCAA CGTCCTGAAC GGCGCCGACG GCCTGTCCGA AATCGCCGCC
GGCCTCGTCG GCCAAGGCCT GGCCATCCTG GAGTCGGTGA AGAAGGGCAT CGCCGACGAG
GACGGCACCG CCGCGAAGAA CACGCCGAAG CCGCAGGTGA TCGAGCGGGT GCAGATCGAG
AACGAGAAGT AG
 
Protein sequence
MFGYRVPAPD QAMLISGGRR GQGGAPFRVV TGHGKFILPV FRKTRFLTLS MQEAEVSETC 
VTKQGIALTV TAVIAFKVGN DTESIVNAGQ RFLSDQNQMS TLTARIFAGH LRSIIGSMTV
EEIVTERQKL AEEVLDTSKS EMGKIGLTVD SLQIMSIDDM KTGYIDAMAA PHKAAIQRQA
QIAQAQATQA SVEAQQEAER NKAEYARQTA IVQAKYKAEV DQAQAIAAQA GPLSAAQAQQ
EVLMAQTELA QRNAELRQQQ LVAEVVKPAE AEAERVRITA AAEAERMRVQ AEAAASYDRV
ALDRMIIDQL PLIVEKAAAG LNGANINVLN GADGLSEIAA GLVGQGLAIL ESVKKGIADE
DGTAAKNTPK PQVIERVQIE NEK