| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8343 |
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| Symbol | |
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| ID | 8339722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9667335 |
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| End bp | 9668723 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644961429 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003119007 |
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| Protein GI | 256397443 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCAAAC GTGGCACGGC ATTAGCGGGG TTGGTTCTCA GTTCACTTCT CACAGCCGGA
TTGACCGCCT GCGGCAGCGG CGGTCCCTCC GGAGTCACCA AGGCGCCGGT GGCGTACGGA
GCGGTCACGC AAGTCGTCGA GGCTCCCGCG ACCGTCACGC CGAAAACACA GATCACCGTC
AACGCGACCG CCGGCGGTTC CGTCGCGCAG CTGATGGTCG CCGACGGACA GCACGTCACC
GCCGGCCAGA CCCTCCTGCG GATCGACTCG CCGGACGCCC AAGCGCAGCT GAACGCGGCG
AAGGCGGCGG ACGCGCAGGC GGCGGCGCAA GGCAAGCGCT CCTCCAGCGG GAGCAGTGCG
ATCGACTTCT CCGAGTCGGA GTCGCTGGCC GACGCCAACG CCCAGAAGTC CTTCGACGCC
GCGCAGACCA CGGCCGAGCA GATCGCCGAT CCGGCGATCA AGGCCTCGAT CCTTAAGCAG
ATCACCAGTG CGCGCAACCA GTACGCCACG GCGTCCTCCG ACGTGCGGAG CACCATAGCG
AACTTCAACA ATGGGCTCGC TTCCGCCTCG GACGTAGTGG GTTCGCTAAG CGGCGCGCAA
CGGACCCAGA CACAAGCTGC GGTCGCTATA GCGCAGAAGA CAGTGGACTC CCTCACTATG
AAGGCCTCTA TAGCCGGGGA CATCTCCCTG CGCAGCGGAG TCGGCGGCGC CAGTGCCTCC
GGAGTGGATG TCTCCTCGCT GCTGTCCCAA CTCGGCGGGA ACCTCGGTTC TCTGGCCGGT
GCCGCAGGGG GTAGCCTCGG GTCGGCCGCC TCCGGCGGCG GAAGCACCGA TCCGAGCGAC
GACACCGTGA TCACTCAGGG TTCTCCAGTG GACTCCGGCG CAGCGCTGCT CGTCATCACC
GACTCCTCGA CGCTAACGCT GACCGCGCAG GTCGACGAGA CCTCGATCCT CCAGATCACC
CCGGGCATCA CCGCGGACGT CCAGCTGGAC GCCGTCCCCG ACGCCGACTA CCAGGCGAGC
GTCATCTCCA TCGACAGCCA GGGCCAGTCC TCCAGCCGGG GCGGCGTCAC CTACCGGGTC
CGGCTCTCGC TGGGCGCCGG CAAGCTCGGG GACGGCTCCG CGGCTCCGGT CCCGCGTCCC
GGGATGAGCG CCGTGGCGGA TCTCCAGGTC GCGAACAAGG CGCACGTGCT CGCCGTGCCG
TCGGCGGCGG TCGTGCACGT CGGCAACCAG GACACGGTGT GGCTGGTGGC CTCGGGCACC
GCGCACCGGC ACGTGGTCCG GCTCGGCGCG CAGGGCGACA CCACGGTGGA GGTCTCGTCG
GGGCTGAACC CCGGAGACGT GATCGTGACC TCGGGGGCCG ACAAGGTCCA CGACGGGCAG
AAGCTCTAG
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| Protein sequence | MTKRGTALAG LVLSSLLTAG LTACGSGGPS GVTKAPVAYG AVTQVVEAPA TVTPKTQITV
NATAGGSVAQ LMVADGQHVT AGQTLLRIDS PDAQAQLNAA KAADAQAAAQ GKRSSSGSSA
IDFSESESLA DANAQKSFDA AQTTAEQIAD PAIKASILKQ ITSARNQYAT ASSDVRSTIA
NFNNGLASAS DVVGSLSGAQ RTQTQAAVAI AQKTVDSLTM KASIAGDISL RSGVGGASAS
GVDVSSLLSQ LGGNLGSLAG AAGGSLGSAA SGGGSTDPSD DTVITQGSPV DSGAALLVIT
DSSTLTLTAQ VDETSILQIT PGITADVQLD AVPDADYQAS VISIDSQGQS SSRGGVTYRV
RLSLGAGKLG DGSAAPVPRP GMSAVADLQV ANKAHVLAVP SAAVVHVGNQ DTVWLVASGT
AHRHVVRLGA QGDTTVEVSS GLNPGDVIVT SGADKVHDGQ KL
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