Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8342 |
Symbol | |
ID | 8339721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9666627 |
End bp | 9667331 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644961428 |
Product | ABC transporter related |
Protein accession | YP_003119006 |
Protein GI | 256397442 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCCG ACATTCCGAA GGCGCAGATA GAGGCAGTCG ACGTCACCCG CTCCTACCGG ATGGACGGGG TGTCCGTGGA CGCCCTGCGC GGGGTCTCGC TGACCATCGA AGAGGGCGAC TACGCGGCGA TCATCGGACC GTCGGGCTCC GGGAAGTCCA CGCTGATGCA CCTGCTCGGC TGTCTGGACC GGCCGACGTC CGGCACGCTC CTGGTCCGGG GACGCGACGT GAGCTCCCTG GACGACAGCG AGCTGGCCGA ACTCAGGAAC CAGACGATCG GTTTCGTCTT CCAGTCCTTC CAGCTGCTGG CGCGTACTAC CGCTCTAGAG AACGTCGCAC TCCCGCTCGT CTATAGAGGA GTGCGCAGAG CGGAACGCAG AAAGCGCGCC GCCGAGGCAC TGGAAGCCGT GAACTTGGGG CATCGCCTAG GGCACCGCCC CACGCAGATG TCCGGTGGGG AACAGCAGCG GGTTGCTATA GCGCGCGCTC TAGTAGGGGA ACCCGCAGTG CTTCTCGCGG ACGAACCCAC AGGGAACCTC GACACCGTCA ACGGCGACGA GGTGATGGGC ATCCTGGAGC GACTCAACAA GGAACGCGGA GTAGCGGTGG TCCTGGTGAC CCATGAAGCA GACATCGCTG CCCGTGCACA ACGGATCATC CGTGTGCGGG ACGGTCTCAT CGAGGAAGCG CCGGTGTCCT CATGA
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Protein sequence | MASDIPKAQI EAVDVTRSYR MDGVSVDALR GVSLTIEEGD YAAIIGPSGS GKSTLMHLLG CLDRPTSGTL LVRGRDVSSL DDSELAELRN QTIGFVFQSF QLLARTTALE NVALPLVYRG VRRAERRKRA AEALEAVNLG HRLGHRPTQM SGGEQQRVAI ARALVGEPAV LLADEPTGNL DTVNGDEVMG ILERLNKERG VAVVLVTHEA DIAARAQRII RVRDGLIEEA PVSS
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