| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8340 |
|---|
| Symbol | |
|---|
| ID | 8339719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9664568 |
|---|
| End bp | 9665377 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644961426 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003119004 |
|---|
| Protein GI | 256397440 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG CTCCCACTCG CGACGAACTC CGCGACCACT TACTGACGCA CCGCATCGCG
GGCGCTGTAG CGACTCCGCG GGAGGACAAC CTGCGCAAGT ACGCCATGTT CGCCGAGCGG
GATCCCTATC ACCTGTTCGG GCTGGAGCCC GAGCGCGTCT GGACGCAGGG CGACGTCATC
AAACTGATGG CCGACCGCGC GGGTGTGTCG GCGGACCCGA AGTTCCGCGC GGGCCAGGAC
CACATCGACG TCGATCTCAC GCTGGACGGC CTGGACCGGT TCGCCGATCG GCTGGGCGTG
GCGCGCGAAC GCCGTCAGCG TGTCCTGGTG GCCACCGGGC ATCCCAGTAC CCTGCTGGCC
GTGCACCTGG CGTTCGCCAC CGGGCTGCGC GAGGCCGGGT GCGAGGTGAT AGAGGCCGGC
GCCGGGTGGT CGTATCAGGC CTCGGCGCAG GTCGGGCGCA AGCGCAGGTC GATCGCGTAC
TTCGGCGGCG TGGGGGTGAC GGCAGAGGGC GGATCGCTGG TGCACACCCA CTCCGCGCGC
CCGATCCGCG CCGCGCTGGC GTCGCTGGCC GGGGACGGCG AGCCGCTGCC GGACCTGGTG
GTCGCCGACC ACGGTTGGTG CGGCGGCGCG GGGCAGACCG GGATCGACGC GATCGGGTTC
GCCGACTCCA ACGACCCGGC GCTGTTCATC GGGGAAGCCG AGGGCATGGT GCAGGTGGCG
GTACCGCTGG ACGACGGCAT CGCGCCGCGC CACTACACGC CTATGTCACG GTACGTTCTC
GCGCGCGCCG GGCTGTCAGG GGCTCTGTAA
|
|---|
| Protein sequence | MTAAPTRDEL RDHLLTHRIA GAVATPREDN LRKYAMFAER DPYHLFGLEP ERVWTQGDVI
KLMADRAGVS ADPKFRAGQD HIDVDLTLDG LDRFADRLGV ARERRQRVLV ATGHPSTLLA
VHLAFATGLR EAGCEVIEAG AGWSYQASAQ VGRKRRSIAY FGGVGVTAEG GSLVHTHSAR
PIRAALASLA GDGEPLPDLV VADHGWCGGA GQTGIDAIGF ADSNDPALFI GEAEGMVQVA
VPLDDGIAPR HYTPMSRYVL ARAGLSGAL
|
|---|
| |