Gene Caci_8339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8339 
Symbol 
ID8339718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9664175 
End bp9664399 
Gene Length225 bp 
Protein Length74 aa 
Translation table11 
GC content69% 
IMG OID644961425 
Productexcision promoter, Xis 
Protein accessionYP_003119003 
Protein GI256397439 
COG category 
COG ID 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGGA GCGCTCGCAC GGGCGGCGAC GCCGCGCGGC TCTCCGAGGT CAAGTTCCTC 
ACGGTCGCCG AAGTCGCCCA GGTCATGCGG GTGTCCAAGA TGACGGTGTA CCGGCTGGTC
CACAGCGGGG AGCTGCCGGC GGTCCGGGTG GGCCGCTCGT TCCGCGTCCC CGAACAAGCC
GTCCAGGAAT ACCTGCGGGA CGCCTACGTG GCAGACACCC TTTAG
 
Protein sequence
MHGSARTGGD AARLSEVKFL TVAEVAQVMR VSKMTVYRLV HSGELPAVRV GRSFRVPEQA 
VQEYLRDAYV ADTL